зеркало из https://github.com/Azure/azurehpc.git
395cbf114e
The HPC image must have changed to include gcc-9.2.0 and openmpi-4.0.2 rather than gcc-8.2.0 and openmpi-4.0.1 respectively. Need to load those modules now instead of the old.
{{{
[hpcuser@compute000000 ~]$ module av
---------------------------------------------------------------------------------------------------------------------------------------------------------------------- /usr/share/Modules/modulefiles ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
dot gcc-9.2.0 module-git module-info modules mpi/hpcx mpi/hpcx-v2.5.0 mpi/impi mpi/impi-2019 mpi/impi_2018.4.274 mpi/impi_2019.5.281 mpi/mvapich2 mpi/mvapich2-2.3.2 mpi/openmpi mpi/openmpi-4.0.2 null use.own
}}}
|
||
|---|---|---|
| .. | ||
| scripts | ||
| flow_norne.sh | ||
| full_install_opm.sh | ||
| install_opm.sh | ||
| readme.md | ||
readme.md
OPM installation and running instructions
Prerequisites
Dependencies for binary version:
- lapack
Installation
First copy the apps directory to the cluster. The azhpc-scp can be used to do this:
azhpc-scp -r $azhpc_dir/apps hpcuser@headnode:.
Alternatively you can checkout the azurehpc repository but you will need to update the paths according to where you put it.
Install from source
For this the headnode needs to be a HC node with CentOS-HPC-7.6 upwards
azhpc-run -u hpcuser $azhpc_dir/apps/opm/full_install_opm.sh
Install binaries
azhpc-run -u hpcuser $azhpc_dir/apps/opm/install_opm.sh
Connect to the headnode
azhpc-connect -u hpcuser headnode
Run the OPM norne scenario
To run on a single node with 30 cores run
qsub -l select=1:ncpus=30:mpiprocs=30 $azhpc_dir/apps/opm/flow_norne.sh
To run on two node with 30 cores run
qsub -l select=2:ncpus=15:mpiprocs=15 $azhpc_dir/apps/opm/flow_norne.sh
Notes:
- All job outputs files will be stored in the user home dir with the prefix name OPM_norne.o.