Allow workdir to be set

- Resolves #87

convoy/settings.py

@@ -2354,7 +2354,9 @@ def task_settings(cloud_pool, config, poolconf, jobspec, conf, missing_images):
     # mount batch root dir
     run_opts.append(
         '-v $AZ_BATCH_NODE_ROOT_DIR:$AZ_BATCH_NODE_ROOT_DIR')
-    # set working directory
+    # set working directory if not already set
+    if not any((x.startswith('-w ') or x.startswith('--workdir '))
+               for x in run_opts):
         run_opts.append('-w $AZ_BATCH_TASK_WORKING_DIR')
     # always add option for envfile
     envfile = '.shipyard.envlist'