Add Singularity grammer/language (#5242)

Co-authored-by: Onno Valkering <onnovalkering@users.noreply.github.com>
Co-authored-by: Colin Seymour <colin@github.com>

.gitmodules

@@ -1062,6 +1062,9 @@
 [submodule "vendor/grammars/vscode-scala-syntax"]
 	path = vendor/grammars/vscode-scala-syntax
 	url = https://github.com/scala/vscode-scala-syntax
+[submodule "vendor/grammars/vscode-singularity"]
+	path = vendor/grammars/vscode-singularity
+	url = https://github.com/onnovalkering/vscode-singularity
 [submodule "vendor/grammars/vscode-slice"]
 	path = vendor/grammars/vscode-slice
 	url = https://github.com/zeroc-ice/vscode-slice

grammars.yml

@@ -917,6 +917,8 @@ vendor/grammars/vscode-prisma:
 - source.prisma
 vendor/grammars/vscode-scala-syntax:
 - source.scala
+vendor/grammars/vscode-singularity:
+- source.singularity
 vendor/grammars/vscode-slice:
 - source.slice
 vendor/grammars/vscode-vlang:

lib/linguist/languages.yml

@@ -5366,6 +5366,14 @@ Sieve:
   codemirror_mode: sieve
   codemirror_mime_type: application/sieve
   language_id: 208976687
+Singularity:
+  type: programming
+  color: "#64E6AD"
+  tm_scope: source.singularity
+  filenames:
+  - Singularity
+  ace_mode: text
+  language_id: 987024632
 Slash:
   type: programming
   color: "#007eff"

samples/Singularity/filenames/Singularity

@@ -0,0 +1,57 @@
+# https://github.com/nickjer/singularity-r/blob/master/Singularity (MIT)
+
+BootStrap: shub
+From: nickjer/singularity-r
+
+%labels
+  Maintainer Jeremy Nicklas
+  RStudio_Version 1.2.5033
+
+%help
+  This will run RStudio Server
+
+%apprun rserver
+  exec rserver "${@}"
+
+%runscript
+  exec rserver "${@}"
+
+%environment
+  export PATH=/usr/lib/rstudio-server/bin:${PATH}
+
+%setup
+  install -Dv \
+    rstudio_auth.sh \
+    ${SINGULARITY_ROOTFS}/usr/lib/rstudio-server/bin/rstudio_auth
+  install -Dv \
+    ldap_auth.py \
+    ${SINGULARITY_ROOTFS}/usr/lib/rstudio-server/bin/ldap_auth
+
+%post
+  # Software versions
+  export RSTUDIO_VERSION=1.2.5033
+
+  # Install RStudio Server
+  apt-get update
+  apt-get install -y --no-install-recommends \
+    ca-certificates \
+    wget \
+    gdebi-core
+  wget \
+    --no-verbose \
+    -O rstudio-server.deb \
+    "https://download2.rstudio.org/server/trusty/amd64/rstudio-server-${RSTUDIO_VERSION}-amd64.deb"
+  gdebi -n rstudio-server.deb
+  rm -f rstudio-server.deb
+
+  # Add support for LDAP authentication
+  wget \
+    --no-verbose \
+    -O get-pip.py \
+    "https://bootstrap.pypa.io/get-pip.py"
+  python3 get-pip.py
+  rm -f get-pip.py
+  pip3 install ldap3
+
+  # Clean up
+  rm -rf /var/lib/apt/lists/*

vendor/README.md

@@ -412,6 +412,7 @@ This is a list of grammars that Linguist selects to provide syntax highlighting
 - **ShellSession:** [atom/language-shellscript](https://github.com/atom/language-shellscript)
 - **Shen:** [rkoeninger/sublime-shen](https://github.com/rkoeninger/sublime-shen)
 - **Sieve:** [Alhadis/language-etc](https://github.com/Alhadis/language-etc)
+- **Singularity:** [onnovalkering/vscode-singularity](https://github.com/onnovalkering/vscode-singularity)
 - **Slash:** [slash-lang/Slash.tmbundle](https://github.com/slash-lang/Slash.tmbundle)
 - **Slice:** [zeroc-ice/vscode-slice](https://github.com/zeroc-ice/vscode-slice)
 - **Slim:** [slim-template/ruby-slim.tmbundle](https://github.com/slim-template/ruby-slim.tmbundle)

vendor/grammars/vscode-singularity

@@ -0,0 +1 @@
+Subproject commit d3da44ec55020125ddba2882d6fae42ce261563b

vendor/licenses/git_submodule/vscode-singularity.dep.yml

@@ -0,0 +1,31 @@
+---
+name: vscode-singularity
+version: d3da44ec55020125ddba2882d6fae42ce261563b
+type: git_submodule
+homepage: https://github.com/onnovalkering/vscode-singularity
+license: mit
+licenses:
+- sources: LICENSE
+  text: |
+    MIT License
+
+    Copyright (c) 2019-present Onno Valkering
+
+    Permission is hereby granted, free of charge, to any person obtaining a copy
+    of this software and associated documentation files (the "Software"), to deal
+    in the Software without restriction, including without limitation the rights
+    to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+    copies of the Software, and to permit persons to whom the Software is
+    furnished to do so, subject to the following conditions:
+
+    The above copyright notice and this permission notice shall be included in all
+    copies or substantial portions of the Software.
+
+    THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+    IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+    FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+    AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+    LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+    OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+    SOFTWARE.
+notices: []