changes to cmake files

CMakeLists.txt

@@ -26,20 +26,26 @@ endif()
 
 #define variables for mkl include directories
 #set your MKL_ROOT here
-set(MKL_ROOT "C:/Program Files (x86)/IntelSWTools/compilers_and_libraries/windows/mkl")
-set(MKL_INCLUDE_DIR ${MKL_ROOT}/include)
-include_directories(${MKL_INCLUDE_DIR})
-link_directories(${MKL_ROOT}/lib/intel64_win)
-link_directories(${MKL_ROOT}/../compiler/lib/intel64_win)
 
-#set(MKL_ROOT "/opt/intel/mkl/")
-#set(MKL_INCLUDE_DIR ${MKL_ROOT}/include)
-#include_directories(${MKL_INCLUDE_DIR})
-#link_directories(${MKL_ROOT}/lib/intel64_lin)
-#link_directories(${MKL_ROOT}/../compiler/lib/intel64_lin)
+if(MSVC)
+ set(MKL_ROOT "C:/Program Files (x86)/IntelSWTools/compilers_and_libraries/windows/mkl")
+ set(MKL_INCLUDE_DIR ${MKL_ROOT}/include)
+ include_directories(${MKL_INCLUDE_DIR})
+ link_directories(${MKL_ROOT}/lib/intel64_win)
+ link_directories(${MKL_ROOT}/../compiler/lib/intel64_win)
+ENDIF(MSVC)
+
+IF(CMAKE_COMPILER_IS_GNUCC)
+  set(MKL_ROOT "/opt/intel/mkl/")
+  set(MKL_INCLUDE_DIR ${MKL_ROOT}/include)
+  include_directories(${MKL_INCLUDE_DIR})
+  link_directories(${MKL_ROOT}/lib/intel64_lin)
+  link_directories(${MKL_ROOT}/../compiler/lib/intel64_lin)
+ENDIF(CMAKE_COMPILER_IS_GNUCC)
 
 # add debug definitions to compiler flags
-set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -DLIGHT_LOGGER")  #-DLOGGER #-DTIMER -DCONCISE #-DSTDERR_ONSCREEN #-DLIGHT_LOGGER -DVERBOSE #-DDUMP #-DVERIFY
+#set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -DLIGHT_LOGGER")  #-DLOGGER #-DTIMER -DCONCISE #-DSTDERR_ONSCREEN #-DLIGHT_LOGGER -DVERBOSE #-DDUMP #-DVERIFY
+set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -DLIGHT_LOGGER -DSTDERR_ONSCREEN -DVERBOSE -DDUMP -DVERIFY")  #-DLOGGER #-DTIMER -DCONCISE #-DSTDERR_ONSCREEN #-DLIGHT_LOGGER -DVERBOSE #-DDUMP #-DVERIFY
 
 set(CONFIG_FLAGS "-DSINGLE") #-DXML -DZERO_BASED_IO
 

drivers/ProtoNN/trainer/CMakeLists.txt

@@ -4,8 +4,11 @@ set (src ProtoNNTrainDriver.cpp)
 
 source_group("src" FILES ${src})
 
-set (CMAKE_RUNTIME_OUTPUT_DIRECTORY_DEBUG ${CMAKE_SOURCE_DIR})
-set (CMAKE_RUNTIME_OUTPUT_DIRECTORY_RELEASE ${CMAKE_SOURCE_DIR})
+#set (CMAKE_RUNTIME_OUTPUT_DIRECTORY_DEBUG ${CMAKE_SOURCE_DIR})
+#set (CMAKE_RUNTIME_OUTPUT_DIRECTORY_RELEASE ${CMAKE_SOURCE_DIR})
+
+set (GLOBAL_BIN_DIR ${CMAKE_BINARY_DIR}/bin)
+set (EXECUTABLE_OUTPUT_PATH ${GLOBAL_BIN_DIR})
 
 add_executable(${tool_name} ${src} ${include})
 target_include_directories(${tool_name} PRIVATE ${CMAKE_SOURCE_DIR}/src/common ${CMAKE_SOURCE_DIR}/src/ProtoNN)
@@ -18,4 +21,4 @@ IF(NOT CMAKE_COMPILER_IS_GNUCC)
  target_link_libraries(${tool_name} common ProtoNN mkl_intel_ilp64  mkl_intel_thread mkl_core libiomp5md)
 ENDIF (NOT CMAKE_COMPILER_IS_GNUCC)
 
-set_property(TARGET ${tool_name} PROPERTY FOLDER "drivers/ProtoNN")
+set_property(TARGET ${tool_name} PROPERTY FOLDER "drivers/ProtoNN")

run_BonsaiPredict_usps10.sh

@@ -25,7 +25,7 @@ ntest="-N 2007"
 #gdb=" gdb --args"
 executable="./BonsaiPredict"
 command=$gdb" "$executable" "$input_format" "$ntest" "$input_dir" "$model_dir
-echo "Running Bonsai with following command: "
+echo "Running Bonsai predict with following command: "
 echo $command
 echo ""
 exec $command

run_BonsaiTrain_usps10.sh

@@ -48,9 +48,9 @@ iters="-I 100"
 ########################################################
 
 #gdb=" gdb --args"
-executable="./Bonsai"
+executable="./BonsaiTrain"
 command=$gdb" "$executable" "$input_format" "$num_features" "$num_labels" "$ntrain" "$ntest" "$projection_dimension" "$tree_depth" "$sigma" "$reg_W" "$reg_Z" "$reg_Theta" "$reg_V" "$sparse_Z" "$sparse_Theta" "$sparse_V" "$sparse_W" "$batch_factor" "$iters" "$input_dir
-echo "Running Bonsai with following command: "
+echo "Running Bonsai train with following command: "
 echo $command
 echo ""
 exec $command