InnerEye-DeepLearning/azure-pipelines
maxilse 1600ef3ddf
Fix DeepMIL for TCGA CRCK dataset (#659)
While we updated DeepMIL for the Panda dataset to work with the latest changes, we did not update DeepMIL for the TCGA CRCK dataset.

This PR updates how the caching of the encoded tiles is done and how the checkpoints of the DeepMIL model is saved and loaded.

No additional tests are required since these are the same functions that we use for the Panda dataset. For all of them a test already exists.

Last, the PR updates the cudatoolkit version, Anton and I found that this is the root cause for all our problems with ddp
2022-02-16 09:50:59 +00:00
..
azure_deployment_template.json Automate deployment of Azure resources (#221) 2020-09-16 20:24:24 +01:00
azureml-conda-environment.yml Cancel queued AzureML jobs when starting a PR build (#640) 2022-01-25 09:07:18 +00:00
build-pr.yml Fix DeepMIL for TCGA CRCK dataset (#659) 2022-02-16 09:50:59 +00:00
build.yaml Upgrade to Pytorch Lightning 1.5.5 (#591) 2021-12-15 10:48:35 +00:00
build_data_quality.yaml Cancel queued AzureML jobs when starting a PR build (#640) 2022-01-25 09:07:18 +00:00
build_windows.yaml Dropping windows tests, but keeping cred-scan (#542) 2021-07-15 12:30:44 +00:00
cancel_aml_jobs.py Cancel queued AzureML jobs when starting a PR build (#640) 2022-01-25 09:07:18 +00:00
cancel_aml_jobs.yml Cancel queued AzureML jobs when starting a PR build (#640) 2022-01-25 09:07:18 +00:00
checkout.yml Cancel queued AzureML jobs when starting a PR build (#640) 2022-01-25 09:07:18 +00:00
checkout_windows.yml Dropping windows tests, but keeping cred-scan (#542) 2021-07-15 12:30:44 +00:00
inner_eye_env.yml Fix for stuck Linux build: Move pytest to Windows (#652) 2022-02-04 11:20:03 +00:00
prepare_conda.yml Fix for stuck Linux build: Move pytest to Windows (#652) 2022-02-04 11:20:03 +00:00
store_settings.yml Fix for HelloWorld example on fresh checkout (#320) 2020-11-17 08:42:42 +01:00
tests_after_training.yml Register all models after training, not only Segmentation models. (#455) 2021-05-12 15:03:35 +01:00
train.yaml Add source code 2020-07-29 00:30:35 +05:30
train_template.yml Register all models after training, not only Segmentation models. (#455) 2021-05-12 15:03:35 +01:00
train_via_submodule.yml Register all models after training, not only Segmentation models. (#455) 2021-05-12 15:03:35 +01:00