[ci] [R-package] enforce more {lintr} checks (#6130)

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James Lamb 2023-10-08 09:42:54 -05:00 коммит произвёл GitHub
Родитель b793cd821c
Коммит 3d9ada7657
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Идентификатор ключа GPG: 4AEE18F83AFDEB23
8 изменённых файлов: 23 добавлений и 13 удалений

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@ -1,5 +1,5 @@
library(lintr)
loadNamespace("lintr")
args <- commandArgs(
trailingOnly = TRUE
@ -33,30 +33,34 @@ LINTERS_TO_USE <- list(
, "any_duplicated" = lintr::any_duplicated_linter()
, "any_is_na" = lintr::any_is_na_linter()
, "assignment" = lintr::assignment_linter()
, "backport" = lintr::backport_linter()
, "boolean_arithmetic" = lintr::boolean_arithmetic_linter()
, "braces" = lintr::brace_linter()
, "class_equals" = lintr::class_equals_linter()
, "commas" = lintr::commas_linter()
, "conjunct_test" = lintr::conjunct_test_linter()
, "duplicate_argument" = lintr::duplicate_argument_linter()
, "empty_assignment" = lintr::empty_assignment_linter()
, "equals_na" = lintr::equals_na_linter()
, "fixed_regex" = lintr::fixed_regex_linter()
, "for_loop_index" = lintr::for_loop_index_linter()
, "function_left" = lintr::function_left_parentheses_linter()
, "function_return" = lintr::function_return_linter()
, "implicit_assignment" = lintr::implicit_assignment_linter()
, "implicit_integers" = lintr::implicit_integer_linter()
, "infix_spaces" = lintr::infix_spaces_linter()
, "inner_combine" = lintr::inner_combine_linter()
, "is_numeric" = lintr::is_numeric_linter()
, "fixed_regex" = lintr::fixed_regex_linter()
, "function_return" = lintr::function_return_linter()
, "lengths" = lintr::lengths_linter()
, "line_length" = lintr::line_length_linter(length = 120L)
, "literal_coercion" = lintr::literal_coercion_linter()
, "long_lines" = lintr::line_length_linter(length = 120L)
, "matrix" = lintr::matrix_apply_linter()
, "missing_argument" = lintr::missing_argument_linter()
, "non_portable_path" = lintr::nonportable_path_linter()
, "numeric_leading_zero" = lintr::numeric_leading_zero_linter()
, "outer_negation" = lintr::outer_negation_linter()
, "package_hooks" = lintr::package_hooks_linter()
, "paren_body" = lintr::paren_body_linter()
, "paste" = lintr::paste_linter()
, "quotes" = lintr::quotes_linter()
, "redundant_equals" = lintr::redundant_equals_linter()
@ -100,6 +104,7 @@ LINTERS_TO_USE <- list(
"%>%" = pipe_text
, "%.%" = pipe_text
, "%..%" = pipe_text
, "|>" = pipe_text
, "?" = interactive_text
, "??" = interactive_text
)
@ -107,6 +112,7 @@ LINTERS_TO_USE <- list(
, "unnecessary_concatenation" = lintr::unnecessary_concatenation_linter()
, "unnecessary_lambda" = lintr::unnecessary_lambda_linter()
, "unreachable_code" = lintr::unreachable_code_linter()
, "unused_import" = lintr::unused_import_linter()
, "vector_logic" = lintr::vector_logic_linter()
, "whitespace" = lintr::whitespace_linter()
)

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@ -1,5 +1,4 @@
library(lightgbm)
library(methods)
# We load in the agaricus dataset
# In this example, we are aiming to predict whether a mushroom is edible

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@ -1,5 +1,4 @@
library(lightgbm)
library(methods)
# Load in the agaricus dataset
data(agaricus.train, package = "lightgbm")

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@ -1,5 +1,4 @@
library(lightgbm)
library(methods)
# Load in the agaricus dataset
data(agaricus.train, package = "lightgbm")

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@ -1,5 +1,5 @@
library(testthat)
library(lightgbm)
library(lightgbm) # nolint: [unused_import]
test_check(
package = "lightgbm"

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@ -183,7 +183,9 @@ test_that("lgb.Dataset: colnames", {
colnames(dtest) <- "asdf"
})
new_names <- make.names(seq_len(ncol(test_data)))
expect_silent(colnames(dtest) <- new_names)
expect_silent({
colnames(dtest) <- new_names
})
expect_equal(colnames(dtest), new_names)
})

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@ -37,7 +37,8 @@ test_that("learning-to-rank with lgb.train() works as expected", {
eval_results <- model$eval_train()
expect_equal(length(eval_results), length(eval_names))
for (result in eval_results) {
expect_true(result[["value"]] > 0.0 && result[["value"]] < 1.0)
expect_true(result[["value"]] > 0.0)
expect_true(result[["value"]] < 1.0)
expect_true(result[["higher_better"]])
expect_identical(result[["data_name"]], "training")
}
@ -104,8 +105,10 @@ test_that("learning-to-rank with lgb.cv() works as expected", {
# check that best score and iter make sense (0.0 < nDCG < 1.0)
best_iter <- cv_bst$best_iter
best_score <- cv_bst$best_score
expect_true(best_iter > 0L && best_iter <= nrounds)
expect_true(best_score > 0.0 && best_score < 1.0)
expect_true(best_iter > 0L)
expect_true(best_iter <= nrounds)
expect_true(best_score > 0.0)
expect_true(best_score < 1.0)
expect_true(abs(best_score - 0.75) < .LGB_NUMERIC_TOLERANCE)
# best_score should be set for the first metric

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@ -1275,7 +1275,9 @@ test_that("params (including dataset params) should be stored in .rds file for B
bst_file <- tempfile(fileext = ".rds")
expect_warning(saveRDS.lgb.Booster(bst, file = bst_file))
expect_warning(bst_from_file <- readRDS.lgb.Booster(file = bst_file))
expect_warning({
bst_from_file <- readRDS.lgb.Booster(file = bst_file)
})
expect_identical(
bst_from_file$params
, list(