[ci] Use Ubuntu 22.04 as `ubuntu-latest` at CI (fixes #5186) (#5288)

2022-12-15 18:05:45 +03:00 · 2022-12-15 18:05:45 +03:00 · a17489328c
--- a/.ci/setup.sh
+++ b/.ci/setup.sh
@ -42,13 +42,13 @@ else  # Linux
            iputils-ping \
            jq \
            libcurl4 \
-            libicu66 \
-            libssl1.1 \
+            libicu-dev \
+            libssl-dev \
            libunwind8 \
            locales \
            netcat \
            unzip \
-            zip
+            zip || exit -1
        if [[ $COMPILER == "clang" ]]; then
            sudo apt-get install --no-install-recommends -y \
                clang \
@ -60,6 +60,10 @@ else  # Linux
        sudo locale-gen ${LANG}
        sudo update-locale
    fi
+    if [[ $TASK == "r-package" ]] && [[ $COMPILER == "clang" ]]; then
+        sudo apt-get install --no-install-recommends -y \
+            libomp-dev
+    fi
    if [[ $TASK == "mpi" ]]; then
        if [[ $IN_UBUNTU_LATEST_CONTAINER == "true" ]]; then
            sudo apt-get update
@ -75,10 +79,10 @@ else  # Linux
    fi
    if [[ $TASK == "gpu" ]]; then
        if [[ $IN_UBUNTU_LATEST_CONTAINER == "true" ]]; then
-            sudo add-apt-repository ppa:mhier/libboost-latest -y
            sudo apt-get update
            sudo apt-get install --no-install-recommends -y \
                libboost1.74-dev \
+                libboost-filesystem1.74-dev \
                ocl-icd-opencl-dev
        else  # in manylinux image
            sudo yum update -y
--- a/.github/workflows/linkchecker.yml
+++ b/.github/workflows/linkchecker.yml
@ -17,7 +17,7 @@ env:
 jobs:
  check-links:
    timeout-minutes: 60
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    steps:
      - name: Checkout repository
        uses: actions/checkout@v3
--- a/.github/workflows/no-response.yml
+++ b/.github/workflows/no-response.yml
@ -9,7 +9,7 @@ on:

 jobs:
  noResponse:
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    steps:
      - uses: lee-dohm/no-response@v0.5.0
        with:
--- a/.github/workflows/optional_checks.yml
+++ b/.github/workflows/optional_checks.yml
@ -9,7 +9,7 @@ on:
 jobs:
  all-successful:
    timeout-minutes: 120
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    steps:
      - name: Checkout repository
        uses: actions/checkout@v3
--- a/.github/workflows/r_configure.yml
+++ b/.github/workflows/r_configure.yml
@ -9,7 +9,7 @@ jobs:
    name: r-configure
    timeout-minutes: 60
    runs-on: ubuntu-latest
-    container: "ubuntu:20.04"
+    container: "ubuntu:22.04"
    steps:
      - name: Install essential software before checkout
        run: |
--- a/.github/workflows/r_package.yml
+++ b/.github/workflows/r_package.yml
@ -33,22 +33,22 @@ jobs:
          ################
          # CMake builds #
          ################
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-package
            compiler: gcc
            r_version: 3.6
            build_type: cmake
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-package
            compiler: gcc
            r_version: 4.2
            build_type: cmake
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-package
            compiler: clang
            r_version: 3.6
            build_type: cmake
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-package
            compiler: clang
            r_version: 4.2
@ -114,7 +114,7 @@ jobs:
            toolchain: MSYS
            r_version: 4.2
            build_type: cran
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-package
            compiler: gcc
            r_version: 4.2
@ -127,7 +127,7 @@ jobs:
          ################
          # Other checks #
          ################
-          - os: ubuntu-latest
+          - os: ubuntu-22.04
            task: r-rchk
            compiler: gcc
            r_version: 4.2
@ -151,7 +151,7 @@ jobs:
          CTAN_MIRROR: https://ctan.math.illinois.edu/systems/win32/miktex
          TINYTEX_INSTALLER: TinyTeX
      - name: Setup and run tests on Linux and macOS
-        if: matrix.os == 'macOS-latest' || matrix.os == 'ubuntu-latest'
+        if: matrix.os == 'macOS-latest' || matrix.os == 'ubuntu-22.04'
        shell: bash
        run: |
          export TASK="${{ matrix.task }}"
@ -159,7 +159,7 @@ jobs:
          export GITHUB_ACTIONS="true"
          if [[ "${{ matrix.os }}" == "macOS-latest" ]]; then
              export OS_NAME="macos"
-          elif [[ "${{ matrix.os }}" == "ubuntu-latest" ]]; then
+          elif [[ "${{ matrix.os }}" == "ubuntu-22.04" ]]; then
              export OS_NAME="linux"
          fi
          export BUILD_DIRECTORY="$GITHUB_WORKSPACE"
@ -181,9 +181,9 @@ jobs:
          $env:TASK = "${{ matrix.task }}"
          & "$env:GITHUB_WORKSPACE/.ci/test_windows.ps1"
  test-r-sanitizers:
-    name: r-sanitizers (ubuntu-latest, R-devel, ${{ matrix.compiler }} ASAN/UBSAN)
+    name: r-sanitizers (ubuntu-22.04, R-devel, ${{ matrix.compiler }} ASAN/UBSAN)
    timeout-minutes: 60
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    container: wch1/r-debug
    strategy:
      fail-fast: false
@ -219,7 +219,7 @@ jobs:
  test-r-debian-clang:
    name: r-package (debian, R-devel, clang)
    timeout-minutes: 60
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    container: rhub/debian-clang-devel
    steps:
      - name: Install Git before checkout
@ -248,7 +248,7 @@ jobs:
          fi
  all-successful:
    # https://github.community/t/is-it-possible-to-require-all-github-actions-tasks-to-pass-without-enumerating-them/117957/4?u=graingert
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    needs: [test, test-r-sanitizers, test-r-debian-clang]
    steps:
    - name: Note that all tests succeeded
--- a/.github/workflows/static_analysis.yml
+++ b/.github/workflows/static_analysis.yml
@ -21,7 +21,7 @@ env:
 jobs:
  test:
    name: ${{ matrix.task }}
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    timeout-minutes: 60
    strategy:
      fail-fast: false
@ -47,7 +47,7 @@ jobs:
  r-check-docs:
    name: r-package-check-docs
    timeout-minutes: 60
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    container: rocker/verse
    steps:
      - name: Trust git cloning LightGBM
@ -82,7 +82,7 @@ jobs:
          fi
  all-successful:
    # https://github.community/t/is-it-possible-to-require-all-github-actions-tasks-to-pass-without-enumerating-them/117957/4?u=graingert
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-22.04
    needs: [test, r-check-docs]
    steps:
    - name: Note that all tests succeeded
--- a/.vsts-ci.yml
+++ b/.vsts-ci.yml
@ -21,7 +21,7 @@ resources:
  - container: linux-artifact-builder
    image: lightgbm/vsts-agent:manylinux_2_28_x86_64
  - container: ubuntu-latest
-    image: 'ubuntu:20.04'
+    image: 'ubuntu:22.04'
    options: "--name ci-container -v /usr/bin/docker:/tmp/docker:ro"
  - container: rbase
    image: wch1/r-debug
@ -151,7 +151,7 @@ jobs:
    OS_NAME: 'linux'
    PRODUCES_ARTIFACTS: 'true'
  pool:
-    vmImage: ubuntu-latest
+    vmImage: ubuntu-22.04
  timeoutInMinutes: 180
  strategy:
    matrix:
@ -299,7 +299,7 @@ jobs:
 ###########################################
  condition: not(startsWith(variables['Build.SourceBranch'], 'refs/pull/'))
  pool:
-    vmImage: 'ubuntu-latest'
+    vmImage: 'ubuntu-22.04'
  container: rbase
  steps:
  - script: |
@ -330,7 +330,7 @@ jobs:
  - R_artifact
  condition: and(succeeded(), not(startsWith(variables['Build.SourceBranch'], 'refs/pull/')))
  pool:
-    vmImage: 'ubuntu-latest'
+    vmImage: 'ubuntu-22.04'
  steps:
  # Create archives with complete source code included (with git submodules)
  - task: ArchiveFiles@2
--- a/R-package/AUTOCONF_UBUNTU_VERSION
+++ b/R-package/AUTOCONF_UBUNTU_VERSION
@ -1 +1 @@
-2.69-11.1
+2.71-2
--- a/R-package/README.md
+++ b/R-package/README.md
@ -352,22 +352,22 @@ This section briefly explains the key files for building a CRAN package. To upda
 At build time, `configure` will be run and used to create a file `Makevars`, using `Makevars.in` as a template.

 1. Edit `configure.ac`.
-2. Create `configure` with `autoconf`. Do not edit it by hand. This file must be generated on Ubuntu 20.04.
+2. Create `configure` with `autoconf`. Do not edit it by hand. This file must be generated on Ubuntu 22.04.

-    If you have an Ubuntu 20.04 environment available, run the provided script from the root of the `LightGBM` repository.
+    If you have an Ubuntu 22.04 environment available, run the provided script from the root of the `LightGBM` repository.

    ```shell
    ./R-package/recreate-configure.sh
    ```

-    If you do not have easy access to an Ubuntu 20.04 environment, the `configure` script can be generated using Docker by running the code below from the root of this repo.
+    If you do not have easy access to an Ubuntu 22.04 environment, the `configure` script can be generated using Docker by running the code below from the root of this repo.

    ```shell
    docker run \
        --rm \
        -v $(pwd):/opt/LightGBM \
        -w /opt/LightGBM \
-        -t ubuntu:20.04 \
+        -t ubuntu:22.04 \
        ./R-package/recreate-configure.sh
    ```

--- a/R-package/configure
+++ b/R-package/configure
--- a/R-package/recreate-configure.sh
+++ b/R-package/recreate-configure.sh
@ -1,7 +1,7 @@
 #!/bin/bash

 # recreates 'configure' from 'configure.ac'
-# this script should run on Ubuntu 20.04
+# this script should run on Ubuntu 22.04
 AUTOCONF_VERSION=$(cat R-package/AUTOCONF_UBUNTU_VERSION)

 # R packages cannot have versions like 3.0.0rc1, but