Kejia/actions (#677)

* Codeql Added

* Adding lint and test yaml

* Names added

* Moved linters

* One workflow

* debug removed tasks

* changed title

* debug

* minor

* files included linting

* check

* minor

* checkout code

* codeql and lint

* remove problematic .py from linting

* ready for pr

* ready for pr

* test

* revert to pr

* update uncontrolled path

* add werkzeug.utils.secure_filename

* add werkzeug.utils.secure_filename

Co-authored-by: saylibapat1997 <sayli.bapat@microsoft.com>
Co-authored-by: kejia_microsoft <kebei.jiang@microsoft.com>

.github/linters/.pylintrc

@@ -0,0 +1,618 @@
+[MASTER]
+
+# A comma-separated list of package or module names from where C extensions may
+# be loaded. Extensions are loading into the active Python interpreter and may
+# run arbitrary code.
+extension-pkg-whitelist=numpy,torch,cv2,pyodbc,pydantic,ciso8601,netcdf4,scipy
+
+# Add files or directories to the blacklist. They should be base names, not
+# paths.
+ignore=CVS
+
+# Add files or directories matching the regex patterns to the blacklist. The
+# regex matches against base names, not paths.
+ignore-patterns=test.*?py,conftest.py
+
+# Python code to execute, usually for sys.path manipulation such as
+# pygtk.require().
+init-hook='import sys; sys.setrecursionlimit(8 * sys.getrecursionlimit())'
+
+# Use multiple processes to speed up Pylint. Specifying 0 will auto-detect the
+# number of processors available to use.
+jobs=1
+
+# Control the amount of potential inferred values when inferring a single
+# object. This can help the performance when dealing with large functions or
+# complex, nested conditions.
+limit-inference-results=100
+
+# List of plugins (as comma separated values of python module names) to load,
+# usually to register additional checkers.
+# load-plugins=pylint_junit
+
+# Pickle collected data for later comparisons.
+persistent=yes
+
+# Specify a configuration file.
+#rcfile=
+
+# When enabled, pylint would attempt to guess common misconfiguration and emit
+# user-friendly hints instead of false-positive error messages.
+suggestion-mode=yes
+
+# Allow loading of arbitrary C extensions. Extensions are imported into the
+# active Python interpreter and may run arbitrary code.
+unsafe-load-any-extension=no
+
+
+[MESSAGES CONTROL]
+
+# Only show warnings with the listed confidence levels. Leave empty to show
+# all. Valid levels: HIGH, INFERENCE, INFERENCE_FAILURE, UNDEFINED.
+confidence=
+
+# Disable the message, report, category or checker with the given id(s). You
+# can either give multiple identifiers separated by comma (,) or put this
+# option multiple times (only on the command line, not in the configuration
+# file where it should appear only once). You can also use "--disable=all" to
+# disable everything first and then reenable specific checks. For example, if
+# you want to run only the similarities checker, you can use "--disable=all
+# --enable=similarities". If you want to run only the classes checker, but have
+# no Warning level messages displayed, use "--disable=all --enable=classes
+# --disable=W".
+disable=too-many-ancestors,
+        too-many-statements,
+        no-value-for-parameter,
+        too-few-public-methods,
+        too-many-locals,
+        too-many-arguments,
+        missing-module-docstring,
+        trailing-whitespace,
+        fixme,
+        print-statement,
+        parameter-unpacking,
+        unpacking-in-except,
+        old-raise-syntax,
+        backtick,
+        import-star-module-level,
+        raw-checker-failed,
+        bad-inline-option,
+        file-ignored,
+        suppressed-message,
+        useless-suppression,
+        deprecated-pragma,
+        use-symbolic-message-instead,
+        apply-builtin,
+        basestring-builtin,
+        buffer-builtin,
+        cmp-builtin,
+        coerce-builtin,
+        execfile-builtin,
+        file-builtin,
+        long-builtin,
+        raw_input-builtin,
+        reduce-builtin,
+        standarderror-builtin,
+        unicode-builtin,
+        xrange-builtin,
+        coerce-method,
+        delslice-method,
+        getslice-method,
+        setslice-method,
+        no-absolute-import,
+        old-division,
+        dict-iter-method,
+        dict-view-method,
+        next-method-called,
+        metaclass-assignment,
+        indexing-exception,
+        raising-string,
+        reload-builtin,
+        oct-method,
+        hex-method,
+        nonzero-method,
+        cmp-method,
+        input-builtin,
+        round-builtin,
+        intern-builtin,
+        unichr-builtin,
+        map-builtin-not-iterating,
+        zip-builtin-not-iterating,
+        range-builtin-not-iterating,
+        filter-builtin-not-iterating,
+        using-cmp-argument,
+        div-method,
+        idiv-method,
+        rdiv-method,
+        exception-message-attribute,
+        invalid-str-codec,
+        sys-max-int,
+        bad-python3-import,
+        deprecated-string-function,
+        deprecated-str-translate-call,
+        deprecated-itertools-function,
+        deprecated-types-field,
+        next-method-defined,
+        dict-items-not-iterating,
+        dict-keys-not-iterating,
+        dict-values-not-iterating,
+        deprecated-operator-function,
+        deprecated-urllib-function,
+        xreadlines-attribute,
+        deprecated-sys-function,
+        exception-escape,
+        comprehension-escape,
+        bad-continuation,
+        unspecified-encoding,
+        use-dict-literal,
+        use-list-literal,
+        import-error,
+        locally-disabled
+
+# Enable the message, report, category or checker with the given id(s). You can
+# either give multiple identifier separated by comma (,) or put this option
+# multiple time (only on the command line, not in the configuration file where
+# it should appear only once). See also the "--disable" option for examples.
+enable=c-extension-no-member,
+
+
+[REPORTS]
+
+# Python expression which should return a score less than or equal to 10. You
+# have access to the variables 'error', 'warning', 'refactor', and 'convention'
+# which contain the number of messages in each category, as well as 'statement'
+# which is the total number of statements analyzed. This score is used by the
+# global evaluation report (RP0004).
+evaluation=10.0 - ((float(5 * error + warning + refactor + convention) / statement) * 10)
+
+# Template used to display messages. This is a python new-style format string
+# used to format the message information. See doc for all details.
+#msg-template=
+
+# Set the output format. Available formats are text, parseable, colorized, json
+# and msvs (visual studio). You can also give a reporter class, e.g.
+# mypackage.mymodule.MyReporterClass.
+output-format=text
+
+# Tells whether to display a full report or only the messages.
+reports=no
+
+# Activate the evaluation score.
+score=yes
+
+
+[REFACTORING]
+
+# Maximum number of nested blocks for function / method body
+max-nested-blocks=5
+
+# Complete name of functions that never returns. When checking for
+# inconsistent-return-statements if a never returning function is called then
+# it will be considered as an explicit return statement and no message will be
+# printed.
+never-returning-functions=sys.exit
+
+
+[BASIC]
+
+# Naming style matching correct argument names.
+argument-naming-style=snake_case
+
+# Regular expression matching correct argument names. Overrides argument-
+# naming-style.
+#argument-rgx=
+
+# Naming style matching correct attribute names.
+attr-naming-style=snake_case
+
+# Regular expression matching correct attribute names. Overrides attr-naming-
+# style.
+#attr-rgx=
+
+# Bad variable names which should always be refused, separated by a comma.
+bad-names=foo,
+          bar,
+          baz,
+          toto,
+          tutu,
+          tata
+
+# Naming style matching correct class attribute names.
+class-attribute-naming-style=any
+
+# Regular expression matching correct class attribute names. Overrides class-
+# attribute-naming-style.
+#class-attribute-rgx=
+
+# Naming style matching correct class names.
+class-naming-style=PascalCase
+
+# Regular expression matching correct class names. Overrides class-naming-
+# style.
+#class-rgx=
+
+# Naming style matching correct constant names.
+const-naming-style=UPPER_CASE
+
+# Regular expression matching correct constant names. Overrides const-naming-
+# style.
+#const-rgx=
+
+# Minimum line length for functions/classes that require docstrings, shorter
+# ones are exempt.
+docstring-min-length=-1
+
+# Naming style matching correct function names.
+function-naming-style=snake_case
+
+# Regular expression matching correct function names. Overrides function-
+# naming-style.
+#function-rgx=
+
+# Good variable names which should always be accepted, separated by a comma.
+good-names=i,
+           j,
+           k,
+           ex,
+           Run,
+           _,
+           df,
+           n,
+           N,
+           t,
+           T,
+           ax,
+           X,
+           y,
+           xx,
+           yy,
+           zz,
+           ll,
+           e,
+           q,
+           X,
+           Y,
+           Z,
+           P,
+           Xi,
+           Yi,
+           x,
+           z,
+           dx,
+           dy,
+           dz
+
+# Include a hint for the correct naming format with invalid-name.
+include-naming-hint=no
+
+# Naming style matching correct inline iteration names.
+inlinevar-naming-style=any
+
+# Regular expression matching correct inline iteration names. Overrides
+# inlinevar-naming-style.
+#inlinevar-rgx=
+
+# Naming style matching correct method names.
+method-naming-style=snake_case
+
+# Regular expression matching correct method names. Overrides method-naming-
+# style.
+#method-rgx=
+
+# Naming style matching correct module names.
+module-naming-style=any
+
+# Regular expression matching correct module names. Overrides module-naming-
+# style.
+#module-rgx=
+
+# Colon-delimited sets of names that determine each other's naming style when
+# the name regexes allow several styles.
+name-group=
+
+# Regular expression which should only match function or class names that do
+# not require a docstring.
+no-docstring-rgx=^_
+
+# List of decorators that produce properties, such as abc.abstractproperty. Add
+# to this list to register other decorators that produce valid properties.
+# These decorators are taken in consideration only for invalid-name.
+property-classes=abc.abstractproperty
+
+# Naming style matching correct variable names.
+variable-naming-style=snake_case
+
+# Regular expression matching correct variable names. Overrides variable-
+# naming-style.
+#variable-rgx=
+
+
+[FORMAT]
+
+# Expected format of line ending, e.g. empty (any line ending), LF or CRLF.
+expected-line-ending-format=
+
+# Regexp for a line that is allowed to be longer than the limit.
+ignore-long-lines=^\s*(# )?.*['"]?<?https?://\S+>?|/.*/.*/
+
+# Number of spaces of indent required inside a hanging or continued line.
+indent-after-paren=4
+
+# String used as indentation unit. This is usually "    " (4 spaces) or "\t" (1
+# tab).
+indent-string='    '
+
+# Maximum number of characters on a single line.
+max-line-length=120
+
+# Maximum number of lines in a module.
+max-module-lines=1000
+
+# List of optional constructs for which whitespace checking is disabled. `dict-
+# separator` is used to allow tabulation in dicts, etc.: {1  : 1,\n222: 2}.
+# `trailing-comma` allows a space between comma and closing bracket: (a, ).
+# `empty-line` allows space-only lines.
+# no-space-check=trailing-comma,
+#               dict-separator
+
+# Allow the body of a class to be on the same line as the declaration if body
+# contains single statement.
+single-line-class-stmt=no
+
+# Allow the body of an if to be on the same line as the test if there is no
+# else.
+single-line-if-stmt=no
+
+
+[LOGGING]
+
+# Format style used to check logging format string. `old` means using %
+# formatting, `new` is for `{}` formatting,and `fstr` is for f-strings.
+logging-format-style=old
+
+# Logging modules to check that the string format arguments are in logging
+# function parameter format.
+logging-modules=logging
+
+
+[MISCELLANEOUS]
+
+# List of note tags to take in consideration, separated by a comma.
+notes=FIXME,
+      XXX,
+      TODO
+
+
+[SIMILARITIES]
+
+# Ignore comments when computing similarities.
+ignore-comments=yes
+
+# Ignore docstrings when computing similarities.
+ignore-docstrings=yes
+
+# Ignore imports when computing similarities.
+ignore-imports=yes
+
+# Minimum lines number of a similarity.
+min-similarity-lines=9
+
+
+[SPELLING]
+
+# Limits count of emitted suggestions for spelling mistakes.
+max-spelling-suggestions=4
+
+# Spelling dictionary name. Available dictionaries: none. To make it work,
+# install the python-enchant package.
+spelling-dict=
+
+# List of comma separated words that should not be checked.
+spelling-ignore-words=
+
+# A path to a file that contains the private dictionary; one word per line.
+spelling-private-dict-file=
+
+# Tells whether to store unknown words to the private dictionary (see the
+# --spelling-private-dict-file option) instead of raising a message.
+spelling-store-unknown-words=no
+
+
+[STRING]
+
+# This flag controls whether the implicit-str-concat-in-sequence should
+# generate a warning on implicit string concatenation in sequences defined over
+# several lines.
+check-str-concat-over-line-jumps=no
+
+
+[TYPECHECK]
+
+# List of decorators that produce context managers, such as
+# contextlib.contextmanager. Add to this list to register other decorators that
+# produce valid context managers.
+contextmanager-decorators=contextlib.contextmanager
+
+# List of members which are set dynamically and missed by pylint inference
+# system, and so shouldn't trigger E1101 when accessed. Python regular
+# expressions are accepted.
+generated-members=numpy.*,np.*,pyspark.sql.functions,collect_list
+
+# Tells whether missing members accessed in mixin class should be ignored. A
+# mixin class is detected if its name ends with "mixin" (case insensitive).
+ignore-mixin-members=yes
+
+# Tells whether to warn about missing members when the owner of the attribute
+# is inferred to be None.
+ignore-none=yes
+
+# This flag controls whether pylint should warn about no-member and similar
+# checks whenever an opaque object is returned when inferring. The inference
+# can return multiple potential results while evaluating a Python object, but
+# some branches might not be evaluated, which results in partial inference. In
+# that case, it might be useful to still emit no-member and other checks for
+# the rest of the inferred objects.
+ignore-on-opaque-inference=yes
+
+# List of class names for which member attributes should not be checked (useful
+# for classes with dynamically set attributes). This supports the use of
+# qualified names.
+ignored-classes=optparse.Values,thread._local,_thread._local,numpy,torch,swagger_client
+
+# List of module names for which member attributes should not be checked
+# (useful for modules/projects where namespaces are manipulated during runtime
+# and thus existing member attributes cannot be deduced by static analysis). It
+# supports qualified module names, as well as Unix pattern matching.
+ignored-modules=numpy,torch,swagger_client,netCDF4,scipy,pyspark.sql.functions
+
+# Show a hint with possible names when a member name was not found. The aspect
+# of finding the hint is based on edit distance.
+missing-member-hint=yes
+
+# The minimum edit distance a name should have in order to be considered a
+# similar match for a missing member name.
+missing-member-hint-distance=1
+
+# The total number of similar names that should be taken in consideration when
+# showing a hint for a missing member.
+missing-member-max-choices=1
+
+# List of decorators that change the signature of a decorated function.
+signature-mutators=
+
+
+[VARIABLES]
+
+# List of additional names supposed to be defined in builtins. Remember that
+# you should avoid defining new builtins when possible.
+additional-builtins=dbutils
+
+# Tells whether unused global variables should be treated as a violation.
+allow-global-unused-variables=yes
+
+# List of strings which can identify a callback function by name. A callback
+# name must start or end with one of those strings.
+callbacks=cb_,
+          _cb
+
+# A regular expression matching the name of dummy variables (i.e. expected to
+# not be used).
+dummy-variables-rgx=_+$|(_[a-zA-Z0-9_]*[a-zA-Z0-9]+?$)|dummy|^ignored_|^unused_
+
+# Argument names that match this expression will be ignored. Default to name
+# with leading underscore.
+ignored-argument-names=_.*|^ignored_|^unused_
+
+# Tells whether we should check for unused import in __init__ files.
+init-import=no
+
+# List of qualified module names which can have objects that can redefine
+# builtins.
+redefining-builtins-modules=six.moves,past.builtins,future.builtins,builtins,io
+
+# temporary workaround for https://github.com/PyCQA/pylint/issues/4577
+init-hook = "import astroid; astroid.context.InferenceContext.max_inferred = 500"
+
+
+[CLASSES]
+
+# List of method names used to declare (i.e. assign) instance attributes.
+defining-attr-methods=__init__,
+                      __new__,
+                      setUp,
+                      __post_init__
+
+# List of member names, which should be excluded from the protected access
+# warning.
+exclude-protected=_asdict,
+                  _fields,
+                  _replace,
+                  _source,
+                  _make
+
+# List of valid names for the first argument in a class method.
+valid-classmethod-first-arg=cls
+
+# List of valid names for the first argument in a metaclass class method.
+valid-metaclass-classmethod-first-arg=cls
+
+
+[DESIGN]
+
+# Maximum number of arguments for function / method.
+max-args=5
+
+# Maximum number of attributes for a class (see R0902).
+max-attributes=10
+
+# Maximum number of boolean expressions in an if statement (see R0916).
+max-bool-expr=5
+
+# Maximum number of branch for function / method body.
+max-branches=12
+
+# Maximum number of locals for function / method body.
+max-locals=15
+
+# Maximum number of parents for a class (see R0901).
+max-parents=7
+
+# Maximum number of public methods for a class (see R0904).
+max-public-methods=20
+
+# Maximum number of return / yield for function / method body.
+max-returns=6
+
+# Maximum number of statements in function / method body.
+max-statements=50
+
+# Minimum number of public methods for a class (see R0903).
+min-public-methods=2
+
+
+[IMPORTS]
+
+# List of modules that can be imported at any level, not just the top level
+# one.
+allow-any-import-level=
+
+# Allow wildcard imports from modules that define __all__.
+allow-wildcard-with-all=no
+
+# Analyse import fallback blocks. This can be used to support both Python 2 and
+# 3 compatible code, which means that the block might have code that exists
+# only in one or another interpreter, leading to false positives when analysed.
+analyse-fallback-blocks=no
+
+# Deprecated modules which should not be used, separated by a comma.
+deprecated-modules=optparse,tkinter.tix
+
+# Create a graph of external dependencies in the given file (report RP0402 must
+# not be disabled).
+ext-import-graph=
+
+# Create a graph of every (i.e. internal and external) dependencies in the
+# given file (report RP0402 must not be disabled).
+import-graph=
+
+# Create a graph of internal dependencies in the given file (report RP0402 must
+# not be disabled).
+int-import-graph=
+
+# Force import order to recognize a module as part of the standard
+# compatibility libraries.
+known-standard-library=
+
+# Force import order to recognize a module as part of a third party library.
+known-third-party=enchant, azureiai-logistics-inventoryplanning
+
+# Couples of modules and preferred modules, separated by a comma.
+preferred-modules=
+
+
+[EXCEPTIONS]
+
+# Exceptions that will emit a warning when being caught. Defaults to
+# "BaseException, Exception".
+overgeneral-exceptions=BaseException,
+                       Exception

.github/linters/black.toml

@@ -0,0 +1,3 @@
+[tool.black]
+line-length = 120
+fast = true

.github/linters/tox.ini

@@ -0,0 +1,129 @@
+[tox]
+envlist = py37-{black,mypy,flake8,bandit,pylint,unit,integration}
+
+[testenv]
+deps =
+    -r{toxinidir}/scripts/build/requirements/piptools.in
+    -r{toxinidir}/scripts/build/requirements/test.in
+    -rrequirements.txt
+
+depends =
+    py37-{mypy,flake8,bandit,pylint,unit,integration}: py37-black
+
+[testenv:py37-black]
+skip_install = true
+deps = black
+commands = black \
+              --config "../black.toml" \
+              "methane" \
+              "tests"
+
+[testenv:py37-mypy]
+skip_install = true
+deps = mypy
+commands =
+    mypy \
+       --config-file "../tox.ini" \
+       "methane"
+
+[testenv:py37-flake8]
+skip_install = true
+deps = flake8
+commands =
+    flake8 \
+       --config "../tox.ini" \
+       "methane"
+
+[testenv:py37-bandit]
+skip_install = true
+deps = bandit
+commands = bandit -r --ini "../tox.ini"
+
+[testenv:py37-pylint]
+deps =
+    pylint
+    pylint-junit
+commands =
+    pylint \
+       --rcfile "../.pylintrc" \
+       "methane"
+
+[testenv:py37-safety]
+skip_install = true
+deps = safety
+commands = safety check --full-report
+
+[testenv:py37-unit]
+deps =
+    pytest
+    coverage
+    pytest-cov
+commands =
+    coverage erase
+    python3 -m pytest \
+       -c "../tox.ini" \
+       -m "not integration and not gpu" \
+       --cov-append \
+       --cov-config "../.coveragerc" \
+       --cov methane \
+       "tests"
+    coverage \
+       report \
+       --fail-under 80 \
+       --include "**/methane/*" \
+       --omit "**/__init__.py"
+
+[testenv:py37-integration]
+deps =
+    pytest
+    pytest-parallel
+commands =
+    python -m pytest \
+       -c "../tox.ini" \
+       -m "integration" \
+       --workers "auto" \
+       --tests-per-worker "auto" \
+       "tests"
+
+[bandit]
+exclude = build,dist,tests,scripts
+number: 4
+recursive: True
+skips = B110,B311,B314,B404,B405,B406
+targets = methane
+
+[flake8]
+max-line-length = 120
+select = F,E,W,B,B901,B902,B903
+exclude =
+    .eggs,
+    .git,
+    .tox,
+    nssm,
+    obj,
+    out,
+    packages,
+    pywin32,
+    tests,
+    swagger_client
+ignore = E722,B001,W503,E203
+
+[pytest]
+junit_family = xunit2
+markers =
+    integration: marks as integration test
+    notebooks: marks as notebook test
+    gpu: marks as gpu test
+    smoke: marks as smoke test
+    spark: marks tests which need Spark
+    cdm: marks tests which need cdm
+    slow: marks tests as slow
+    unit: fast offline tests
+    nightly: tests run nightly, but not on PRs
+
+[mypy]
+python_version = 3.7
+ignore_missing_imports = True
+strict_optional = False
+follow_imports = silent
+no_site_packages = True

.github/workflows/codeql.yml

@@ -0,0 +1,55 @@
+# For most projects, this workflow file will not need changing; you simply need
+# to commit it to your repository.
+#
+# You may wish to alter this file to override the set of languages analyzed,
+# or to provide custom queries or build logic.
+#
+# ******** NOTE ********
+# We have attempted to detect the languages in your repository. Please check
+# the `language` matrix defined below to confirm you have the correct set of
+# supported CodeQL languages.
+#
+name: CodeQL
+
+on:
+  push:
+    branches: [ main, staging ]
+  pull_request:
+    # The branches below must be a subset of the branches above
+    branches: [ main, staging ]
+  schedule:
+    - cron: '00 13 * * 1'
+
+jobs:
+  analyze:
+    name: Analyze
+    runs-on: ubuntu-18.04
+    permissions:
+      actions: read
+      contents: read
+      security-events: write
+
+    strategy:
+      fail-fast: false
+      matrix:
+        language: [ 'python' ]
+
+    steps:
+    - name: Checkout repository
+      uses: actions/checkout@v3
+
+    # Initializes the CodeQL tools for scanning.
+    - name: Initialize CodeQL
+      uses: github/codeql-action/init@v1
+      with:
+        languages: ${{ matrix.language }}
+        # If you wish to specify custom queries, you can do so here or in a config file.
+        # By default, queries listed here will override any specified in a config file.
+        # Prefix the list here with "+" to use these queries and those in the config file.
+        # queries: ./path/to/local/query, your-org/your-repo/queries@main
+
+    # ℹ️ Command-line programs to run using the OS shell.
+    # 📚 https://git.io/JvXDl
+
+    - name: Perform CodeQL Analysis
+      uses: github/codeql-action/analyze@v1

.github/workflows/lint.yml

@@ -0,0 +1,92 @@
+---
+###########################
+###########################
+## Linter GitHub Actions ##
+###########################
+###########################
+name: Lint
+
+#
+# Documentation:
+# https://help.github.com/en/articles/workflow-syntax-for-github-actions
+#
+
+#############################
+# Start the job on all push #
+#############################
+on: [ push, pull_request, workflow_dispatch ]
+
+###############
+# Set the Job #
+###############
+jobs:
+  # Name the Job
+  lint_code_base:
+    # Set the agent to run on
+    runs-on: ubuntu-latest
+
+    ##################
+    # Load all steps #
+    ##################
+    steps:
+      ##########################
+      # Checkout the code base #
+      ##########################
+      - name: Checkout Code
+        uses: actions/checkout@v3
+        with:
+          fetch-depth: 0
+      - name: Lint Code Base
+        uses: github/super-linter@v4.8.4
+        env:
+          VALIDATE_PYTHON_BLACK: true
+          VALIDATE_PYTHON_FLAKE8: true
+          VALIDATE_PYTHON_PYLINT: true
+          PYTHON_BLACK_CONFIG_FILE: black.toml
+          PYTHON_FLAKE8_CONFIG_FILE: tox.ini
+          PYTHON_PYLINT_CONFIG_FILE: .pylintrc
+          FILTER_REGEX_INCLUDE: .*scenarios/.*
+          FILTER_REGEX_EXCLUDE: .*tests/.*|.*scenarios/action_recognition/.*|.*scenarios/classification/tools/sweep.py*
+          DEFAULT_BRANCH: main
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+      # - name: Bandit Security Linter
+      #   uses: jpetrucciani/bandit-check@master
+      #   with:
+      #     bandit_flags: '-c .bandit'
+
+  # test_code_base:
+  #   # Set the agent to run on
+  #   runs-on: ubuntu-latest
+
+  #   ##################
+  #   # Unit and integration test steps #
+  #   ##################
+  #   steps:      
+  #     - name: Checkout Code
+  #       uses: actions/checkout@v3
+  #     - name: Add Conda to PATH
+  #       run: |
+  #         echo "##vso[task.prependpath]/data/anaconda/bin"
+
+  #     - name: 'Remove conda env in case it was not created correctly'
+  #       run: |
+  #         rm -rf /data/anaconda/envs/cv
+        
+  #     - name: 'Create and activate conda environment'
+  #       run: |
+  #         conda env create -f environment.yml
+  #         source activate cv
+  #         conda env list
+
+  #     - name: 'Run unit and (only on Linux GPU) integration tests'
+  #       run: |
+  #         source activate cv
+  #         # python -m ipykernel install --user --name cv --display-name "cv"
+  #         pytest --durations 100 tests --junitxml=junit/test-unitttest.xml -m "not azuremlnotebooks and not linuxgpu"
+
+  #     - name: 'Cleanup Task'
+  #       run: |
+  #           echo Remove Conda Environment
+  #           conda remove -n cv --all -q --force -y
+  #           conda env list
+  #           echo Done Cleanup

contrib/crowd_counting/crowdcounting/demo/app-advanced-cpu.py

@@ -1,6 +1,7 @@
 import os
 import sys
 from crowdcounting import CrowdCountModelPose, CrowdCountModelMCNN, Router
+from werkzeug.utils import secure_filename
 
 from flask import (
     Flask,
@@ -94,6 +95,7 @@ def use_site_file():
     result = request.form["fileindex"]
 
     local_image = "/".join([target, result])
+    local_image = secure_filename(local_image)
 
     with open(local_image, "rb") as f:
         file_bytes = f.read()

contrib/crowd_counting/crowdcounting/demo/app-advanced.py

@@ -1,6 +1,7 @@
 import os
 import sys
 from crowdcounting import CrowdCountModelPose, CrowdCountModelMCNN, Router
+from werkzeug.utils import secure_filename
 
 from flask import (
     Flask,
@@ -94,6 +95,7 @@ def use_site_file():
     result = request.form["fileindex"]
 
     local_image = "/".join([target, result])
+    local_image = secure_filename(local_image)
 
     with open(local_image, "rb") as f:
         file_bytes = f.read()