Adding ts and js files

CRNEngine/CRNEngineJS/Content/placeholder.js

@@ -1 +1,4 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 // This file takes the place of the W# output, in cases where W# is not invoked (i.e. server mode). A file must exist, even if it's empty, so that Webpack can handle references properly.

CRNEngine/CRNEngineJSBench/Benchmark.d.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 declare class BenchmarkResult {
     Name: string;
     Min: number;

CRNEngine/CRNEngineJSBench/Benchmark.ts

@@ -1,4 +1,7 @@
-class BenchmarkResult {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+class BenchmarkResult {
     constructor(public Name: string, public Min: number, public Max: number, public Mean: number, public Median: number, public StdDev: number, public SampleCount: number) { };
 }
 

CRNEngine/CRNEngineJSBench/BenchmarkApp.d.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 declare var Microsoft: any;
 declare var Benchmark: any;
 declare var CVode: any;

CRNEngine/CRNEngineJSBench/BenchmarkApp.ts

@@ -1,4 +1,7 @@
-var Microsoft: any;
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var Microsoft: any;
 
 var Benchmark: any;
 var CVode: any;

CRNEngine/CRNEngineJSBench/Tests.d.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 declare var Papa: any;
 declare class Tests {
     private static program_simulate_oslo_am;

CRNEngine/CRNEngineJSBench/Tests.ts

@@ -1,4 +1,7 @@
-// var Papa: any;
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+// var Papa: any;
 declare var Papa: any;
 
 class Tests {

CRNEngine/CRNEngineJSBench/app.d.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 declare var Microsoft: any;
 declare let CRNEngine: any;
 declare function benchmark(): void;

CRNEngine/CRNEngineJSBench/app.ts

@@ -1,4 +1,7 @@
-var Microsoft: any;
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var Microsoft: any;
 
 let CRNEngine = Microsoft.Research.CRNEngine;
 

CRNEngine/CRNEngineTSWrapper/Scripts/CRNEngine.ts

@@ -1,4 +1,7 @@
-import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 import * as Interfaces from './Interfaces';
 import * as Internals from './InternalInterfaces';
 import * as Rx from 'rx';

CRNEngine/CRNEngineTSWrapper/Scripts/CRNEngine.worker.ts

@@ -1,4 +1,7 @@
-import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 import * as Interfaces from './Interfaces';
 import * as Internals from './InternalInterfaces';
 

CRNEngine/CRNEngineTSWrapper/Scripts/FastTasks.worker.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from './Interfaces';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from './Interfaces';
 import * as Internals from './InternalInterfaces';
 
 importScripts("WebWorkerSafeChecks.js");

CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces.ts

@@ -1,4 +1,7 @@
-import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 export type CRN = WGI.Microsoft.Research.CRNEngine.Gui;
 export type Model = WGI.Microsoft.Research.CRNEngine.GuiModel;
 export type IG = WGI.Microsoft.Research.CRNEngine.GuiIG;

CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces.ts

@@ -1,4 +1,7 @@
-// This file contains the interfaces for the messages exchanged by the background threads and the main thread.
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+// This file contains the interfaces for the messages exchanged by the background threads and the main thread.
 import * as I from "./Interfaces";
 
 export type WorkerResponse_Error = { mtype: "error", error: I.Error }

CRNEngine/CRNEngineTSWrapper/Scripts/WebSharperGeneratedInterfaces.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 //These interfaces are code generated from F#, any changes to this file will be lost.
 export namespace WebSharperGeneratedInterfaces {
 

CRNEngine/CRNEngineTSWrapper/Scripts/WebWorkerSafeChecks.ts

@@ -1,4 +1,7 @@
-//PhantomJS which is used in build agent test environment does not have console. Placing a stub here, so the scripts calling console won't crash
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+//PhantomJS which is used in build agent test environment does not have console. Placing a stub here, so the scripts calling console won't crash
 if (typeof console === "undefined")
     console = <any>{
         assert: (test?: boolean, message?: string, ...optionalParams: any[]) => { throw "Assertion not supported";},

CRNEngine/CRNEngineTSWrapper/Scripts/WsEmGlue.ts

@@ -1,4 +1,7 @@
-class WsEmGlue {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+class WsEmGlue {
     constructor(public Module: any) { }
     /*
             sN:int,

CRNEngine/CRNEngineTSWrapper/Scripts/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "worker-loader*" {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();
     }

CRNEngine/CRNEngineTSWrapper/Tests/Config.ts

@@ -1 +1,4 @@
-export var Timeout = 30000;
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+export var Timeout = 30000;

CRNEngine/CRNEngineTSWrapper/Tests/FilzbachTests.ts

@@ -1,4 +1,7 @@
-/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
 /// <reference path="../Scripts/typings/requirejs/require.d.ts" />
 
 import Config = require('./Config');

CRNEngine/CRNEngineTSWrapper/Tests/InferenceTests.ts

@@ -1,4 +1,7 @@
-/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
 /// <reference path="../Scripts/typings/requirejs/require.d.ts" />
 
 import Interfaces = require("../Scripts/src/Interfaces");

CRNEngine/CRNEngineTSWrapper/Tests/RNGTests.ts

@@ -1,4 +1,7 @@
-/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
 /// <reference path="../Scripts/typings/requirejs/require.d.ts" />
 
 import Config = require('./Config');

CRNEngine/CRNEngineTSWrapper/Tests/StateSpaceTests.ts

@@ -1,4 +1,7 @@
-/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <reference path="../Scripts/typings/jasmine/jasmine.d.ts" />
 /// <reference path="../Scripts/typings/requirejs/require.d.ts" />
 
 import Interfaces = require("../Scripts/src/Interfaces");

CRNEngine/CRNEngineTSWrapper/Tests/WebSharperResultsTests.ts

@@ -1,4 +1,7 @@
-import Config = require('./Config');
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import Config = require('./Config');
 
 declare var Microsoft: any;
 

CRNEngine/CRNEngineTSWrapper_Samples/Exports/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/FastTasks/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/Inference/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/Parser/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/Probabilities/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/Serialized/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/Simulator/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/StateSpace/app.ts

@@ -1,4 +1,7 @@
-import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as Interfaces from "../../CRNEngineTSWrapper/Scripts/Interfaces";
 import CRNEngine from "../../CRNEngineTSWrapper/Scripts/CRNEngine";
 import "../samples.css";
 import "./styles.css";

CRNEngine/CRNEngineTSWrapper_Samples/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();

CRNEngine/CRNEngineTSWrapper_Samples/webpack.config.js

@@ -1,4 +1,7 @@
-"use strict";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+"use strict";
 var webpack = require('webpack');
 var HtmlWebpackPlugin = require('html-webpack-plugin');
 var CleanWebpackPlugin = require('clean-webpack-plugin');

CRNEngine/CRNJobsManager/Scripts/App.ts

@@ -1,4 +1,7 @@
-import * as ko from "knockout";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as ko from "knockout";
 import { Observable } from "rx";
 import CRNEngine from './../../CRNEngineTSWrapper/Scripts/CRNEngine';
 import { JobDescriptor, JobFile } from "../../CRNEngineTSWrapper/Scripts/Interfaces";

CRNEngine/CRNJobsManager/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "idd" {
     var InteractiveDataDisplay: any;
     export = InteractiveDataDisplay;

CRNEngine/CRNJobsManager/webpack.config.js

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 // Webpack is executed by a custom target in the .csproj file. Webpack output is collected for packaging and deployment by another custom target.
 "use strict";
 var webpack = require('webpack');

CRNEngine/HTML5CRN/Scripts/App.ts

@@ -1,4 +1,7 @@
-/*import { ServiceWorker } from './Scripts/ServiceWorker';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/*import { ServiceWorker } from './Scripts/ServiceWorker';
 let serviceWorker = new ServiceWorker();*/
 
 import * as $ from 'jquery';

CRNEngine/HTML5CRN/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "idd" {
     var InteractiveDataDisplay: any;
     export = InteractiveDataDisplay;

CRNEngine/HTML5CRN/webpack.config.js

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 // Webpack is executed by a custom target in the .csproj file. Webpack output is collected for packaging and deployment by another custom target.
 "use strict";
 var webpack = require('webpack');

ClassicDSD/ClassicDSDHTML5/Scripts/Adapters/DSDCRNExpandedParser.ts

@@ -1,4 +1,7 @@
-import * as GenericExpandingParser from '../../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/Adapters/GenericExpandingParser';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as GenericExpandingParser from '../../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/Adapters/GenericExpandingParser';
 import DSD from '../../../ClassicDSDTSWrapper/Scripts/ClassicDSD';
 import * as Interfaces from '../../../ClassicDSDTSWrapper/Scripts/Interfaces';
 import * as CrnInterfaces from '../../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';

ClassicDSD/ClassicDSDHTML5/Scripts/Adapters/DSDCRNUnexpandedParser.ts

@@ -1,4 +1,7 @@
-import * as GenericDSDParser from '../../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/Adapters/GenericDSDParser';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as GenericDSDParser from '../../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/Adapters/GenericDSDParser';
 import DSD from '../../../ClassicDSDTSWrapper/Scripts/ClassicDSD';
 import * as Interfaces from '../../../ClassicDSDTSWrapper/Scripts/Interfaces';
 import DSDParsingOptions from '../DSDParsingOptions';

ClassicDSD/ClassicDSDHTML5/Scripts/DSDDirectives.ts

@@ -1,4 +1,7 @@
-import { ExternalSetting as ExternalSetting, CRN as CRN } from '../../../HTML5SharedGUI/CRNComponent/Scripts/crnVM';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import { ExternalSetting as ExternalSetting, CRN as CRN } from '../../../HTML5SharedGUI/CRNComponent/Scripts/crnVM';
 import { DsdSettings as DsdSettings } from '../../ClassicDSDTSWrapper/Scripts/Interfaces';
 import * as DsdInterfaces from '../../ClassicDSDTSWrapper/Scripts/WebSharperGeneratedInterfaces';
 import * as ko from "knockout";

ClassicDSD/ClassicDSDHTML5/Scripts/DSDLang.ts

@@ -1,4 +1,7 @@
-var DSDLanguage = {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var DSDLanguage = {
     displayName: 'DSD',       // start by writing your language name here
     name: 'DSD',
     mimeTypes: ['text/x-dsd'],

ClassicDSD/ClassicDSDHTML5/Scripts/DSDParsingOptions.ts

@@ -1,4 +1,7 @@
-import ClassicDSD from '../../ClassicDSDTSWrapper/Scripts/ClassicDSD';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import ClassicDSD from '../../ClassicDSDTSWrapper/Scripts/ClassicDSD';
 import Options from '../../../HTML5SharedGUI/GenericComponents/Scripts/Options';
 
 class DSDParsingOptions extends Options {

ClassicDSD/ClassicDSDHTML5/Scripts/SequencesDatabase/SequencesDatabase.ts

@@ -1,4 +1,7 @@
-import "./SequencesDatabase.css"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import "./SequencesDatabase.css"
 import * as ko from 'knockout';
 import DSD from '../../../ClassicDSDTSWrapper/Scripts/ClassicDSD';
 import * as fileSaver from "file-saver";

ClassicDSD/ClassicDSDHTML5/Scripts/app.ts

@@ -1,4 +1,7 @@
-import { Launch as Bootstrap } from '../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/GenericApp';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import { Launch as Bootstrap } from '../../../HTML5SharedGUI/HTML5DSD_Generic/Scripts/GenericApp';
 import { Parser as NotExpandingParser } from './Adapters/DSDCRNUnexpandedParser';
 import { Parser as ExpandingParser } from './Adapters/DSDCRNExpandedParser';
 import { INamedMonarchLanguage } from '../../../HTML5SharedGUI/CodeEditor/Scripts/CodeEditor';

ClassicDSD/ClassicDSDHTML5/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "idd" {
     var InteractiveDataDisplay: any;
     export = InteractiveDataDisplay;

ClassicDSD/ClassicDSDHTML5/webpack.config.js

@@ -1,4 +1,7 @@
-/// <binding AfterBuild='Run - Development' />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <binding AfterBuild='Run - Development' />
 "use strict";
 var webpack = require('webpack');
 var HtmlWebpackPlugin = require('html-webpack-plugin');

ClassicDSD/ClassicDSDJS/Content/placeholder.js

@@ -1 +1,4 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 // This file takes the place of the W# output, in cases where W# is not invoked (i.e. server mode). A file must exist, even if it's empty, so that Webpack can handle references properly.

ClassicDSD/ClassicDSDTSWrapper/Scripts/ClassicDSD.ts

@@ -1,4 +1,7 @@
-import "jquery";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import "jquery";
 import * as Rx from 'rx';
 import * as InternalInterfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
 import * as CRNInterfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';

ClassicDSD/ClassicDSDTSWrapper/Scripts/ClassicDSD.worker.ts

@@ -1,4 +1,7 @@
-// Import the generic Worker. Note that here I'm importing it as a regular module, rather than as a web worker constructor (i.e. via worker-loader).
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+// Import the generic Worker. Note that here I'm importing it as a regular module, rather than as a web worker constructor (i.e. via worker-loader).
 import * as CRNEngineWorker from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/CRNEngine.worker";
 import * as CRNInterfaces from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces";
 import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";

ClassicDSD/ClassicDSDTSWrapper/Scripts/DefaultDatabase.ts

@@ -1,4 +1,7 @@
-var database = {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var database = {
     toeholds: "TATTCC\r\n" +
     "GCTA\r\n" +
     "GTCA\r\n" +

ClassicDSD/ClassicDSDTSWrapper/Scripts/Interfaces.ts

@@ -1,4 +1,7 @@
-import * as CRN from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as CRN from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
 import * as Interfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';
 import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 

ClassicDSD/ClassicDSDTSWrapper/Scripts/WebSharperGeneratedInterfaces.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 //These interfaces are code generated from F#, any changes to this file will be lost.
 export namespace WebSharperGeneratedInterfaces {
 

ClassicDSD/ClassicDSDTSWrapper/Scripts/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "worker-loader*" {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();
     }

ClassicDSD/ClassicDSDTSWrapper_Samples/Compile/app.ts

@@ -1,4 +1,7 @@
-import ClassicDSD from "../../ClassicDSDTSWrapper/Scripts/ClassicDSD";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import ClassicDSD from "../../ClassicDSDTSWrapper/Scripts/ClassicDSD";
 import * as DSDInterfaces from "../../ClassicDSDTSWrapper/Scripts/Interfaces";
 import * as CRNInterfaces from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces";
 import "../samples.css"

ClassicDSD/ClassicDSDTSWrapper_Samples/JIT/app.ts

@@ -1,4 +1,7 @@
-import ClassicDSD from "../../ClassicDSDTSWrapper/Scripts/ClassicDSD";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import ClassicDSD from "../../ClassicDSDTSWrapper/Scripts/ClassicDSD";
 import * as Interfaces from "../../ClassicDSDTSWrapper/Scripts/Interfaces";
 import * as CRNInterfaces from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces";
 import "../samples.css"

ClassicDSD/ClassicDSDTSWrapper_Samples/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();

ClassicDSD/ClassicDSDTSWrapper_Samples/webpack.config.js

@@ -1,4 +1,7 @@
-"use strict";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+"use strict";
 var webpack = require('webpack');
 var HtmlWebpackPlugin = require('html-webpack-plugin');
 var CleanWebpackPlugin = require('clean-webpack-plugin');

ClassicGEC/ClassicGECHTML5/Scripts/Adapters/GECCodeSource.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 import Editor from '../GECCodeEditor';
 import * as ModificationIndicator from '../../../../HTML5SharedGUI/GenericComponents/Scripts/ModificationIndicators';
 import * as Features from '../Features';

ClassicGEC/ClassicGECHTML5/Scripts/Adapters/PartsDBCodeSource.ts

@@ -1,4 +1,7 @@
-import Editor from '../PartsCodeEditor';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import Editor from '../PartsCodeEditor';
 import * as ModificationIndicator from '../../../../HTML5SharedGUI/GenericComponents/Scripts/ModificationIndicators';
 import * as Features from '../Features';
 import * as KOCodeEditor from '../../../../HTML5SharedGUI/HTML5CRN_Lib/Scripts/Adapters/KnockoutBasedCodeEditor';

ClassicGEC/ClassicGECHTML5/Scripts/Adapters/ReactionsDBCodeSource.ts

@@ -1,4 +1,7 @@
-import Editor from '../ReactionsCodeEditor';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import Editor from '../ReactionsCodeEditor';
 import * as ModificationIndicator from '../../../../HTML5SharedGUI/GenericComponents/Scripts/ModificationIndicators';
 import * as Features from '../Features';
 import * as KOCodeEditor from '../../../../HTML5SharedGUI/HTML5CRN_Lib/Scripts/Adapters/KnockoutBasedCodeEditor';

ClassicGEC/ClassicGECHTML5/Scripts/App.ts

@@ -1,4 +1,7 @@
-/*import { ServiceWorker } from './Scripts/ServiceWorker';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/*import { ServiceWorker } from './Scripts/ServiceWorker';
 let serviceWorker = new ServiceWorker();*/
 
 import "jqueryui";

ClassicGEC/ClassicGECHTML5/Scripts/Features.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 //bind to specific DOM element and occupy it
 export interface IUIBindable {
     Bind(elem: HTMLElement): void;

ClassicGEC/ClassicGECHTML5/Scripts/GECCodeEditor.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 import CodePad from "../../../HTML5SharedGUI/CodeEditor/Scripts/CodePad";
 import { INamedMonarchLanguage } from '../../../HTML5SharedGUI/CodeEditor/Scripts/CodeEditor';
 

ClassicGEC/ClassicGECHTML5/Scripts/GECLang.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 var GECLanguage = {
     displayName: 'GEC',       // start by writing your language name here
     name: 'GEC',

ClassicGEC/ClassicGECHTML5/Scripts/Operations/GecParseOperation.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 import * as $ from 'jquery';
 import GEC from '../../../ClassicGECTSWrapper/Scripts/ClassicGEC';
 import * as Interfaces from '../../../ClassicGECTSWrapper/Scripts/Interfaces';

ClassicGEC/ClassicGECHTML5/Scripts/Operations/GetSolutionOperation.ts

@@ -1,4 +1,7 @@
-import * as $ from 'jquery';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as $ from 'jquery';
 import GEC from '../../../ClassicGECTSWrapper/Scripts/ClassicGEC';
 import * as Interfaces from '../../../ClassicGECTSWrapper/Scripts/Interfaces';
 import * as CRN from '../../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';

ClassicGEC/ClassicGECHTML5/Scripts/PartsCodeEditor.ts

@@ -1,4 +1,7 @@
-import CodePad from "../../../HTML5SharedGUI/CodeEditor/Scripts/CodePad";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import CodePad from "../../../HTML5SharedGUI/CodeEditor/Scripts/CodePad";
 import { INamedMonarchLanguage } from '../../../HTML5SharedGUI/CodeEditor/Scripts/CodeEditor';
 
 class GECCodeEditor extends CodePad {

ClassicGEC/ClassicGECHTML5/Scripts/PartsLang.ts

@@ -1,4 +1,7 @@
-var PartsLanguage = {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var PartsLanguage = {
     displayName: 'GECParts',       // start by writing your language name here
     name: 'GECParts',
     mimeTypes: ['text/x-crn'],

ClassicGEC/ClassicGECHTML5/Scripts/ReactionsCodeEditor.ts

@@ -1,4 +1,7 @@
-import CodePad from "../../../HTML5SharedGUI/CodeEditor/Scripts/CodePad";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import CodePad from "../../../HTML5SharedGUI/CodeEditor/Scripts/CodePad";
 import { INamedMonarchLanguage } from '../../../HTML5SharedGUI/CodeEditor/Scripts/CodeEditor';
 
 class GECCodeEditor extends CodePad {

ClassicGEC/ClassicGECHTML5/Scripts/ReactionsLang.ts

@@ -1,4 +1,7 @@
-var ReactionsLanguage = {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var ReactionsLanguage = {
     displayName: 'GECReactions',       // start by writing your language name here
     name: 'GECReactions',
     mimeTypes: ['text/x-crn'],

ClassicGEC/ClassicGECHTML5/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "*.html"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "*.html"
 declare module "idd" {
     var InteractiveDataDisplay: any;
     export = InteractiveDataDisplay;

ClassicGEC/ClassicGECHTML5/webpack.config.js

@@ -1,4 +1,7 @@
-/// <binding AfterBuild='Run - Development' />
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+/// <binding AfterBuild='Run - Development' />
 "use strict";
 var webpack = require('webpack');
 var HtmlWebpackPlugin = require('html-webpack-plugin');

ClassicGEC/ClassicGECJS/Content/placeholder.js

@@ -1 +1,4 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 // This file takes the place of the W# output, in cases where W# is not invoked (i.e. server mode). A file must exist, even if it's empty, so that Webpack can handle references properly.

ClassicGEC/ClassicGECTSWrapper/Scripts/ClassicGEC.ts

@@ -1,4 +1,7 @@
-import "jquery";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import "jquery";
 import * as Rx from 'rx';
 import * as InternalInterfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
 import * as CRNInterfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';

ClassicGEC/ClassicGECTSWrapper/Scripts/ClassicGEC.worker.ts

@@ -1,4 +1,7 @@
-// Import the generic Worker. Note that here I'm importing it as a regular module, rather than as a web worker constructor (i.e. via worker-loader).
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+// Import the generic Worker. Note that here I'm importing it as a regular module, rather than as a web worker constructor (i.e. via worker-loader).
 import * as CRNEngineWorker from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/CRNEngine.worker";
 import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 import * as Interfaces from "./Interfaces";

ClassicGEC/ClassicGECTSWrapper/Scripts/DefaultDatabase.ts

@@ -1,4 +1,7 @@
-var database = {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+var database = {
     parts: "i723017,pcr,codes(xylR;0.001)\n" +
         "i723024, pcr, codes(phzM;0.001)\n" +
         "e0040, pcr, codes(gfp;0.01)\n" +

ClassicGEC/ClassicGECTSWrapper/Scripts/Interfaces.ts

@@ -1,4 +1,7 @@
-import * as CRN from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as CRN from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces';
 import { WebSharperGeneratedInterfaces as WGI } from "./WebSharperGeneratedInterfaces";
 import * as Interfaces from '../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces';
 

ClassicGEC/ClassicGECTSWrapper/Scripts/JSBOL.ts

@@ -1,4 +1,7 @@
-import * as CRNInterfaces from "./../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import * as CRNInterfaces from "./../../../CRNEngine/CRNEngineTSWrapper/Scripts/InternalInterfaces";
 import * as Interfaces from "./Interfaces";
 import * as sboljs from 'sboljs';
 

ClassicGEC/ClassicGECTSWrapper/Scripts/WebSharperGeneratedInterfaces.ts

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 //These interfaces are code generated from F#, any changes to this file will be lost.
 export namespace WebSharperGeneratedInterfaces {
 

ClassicGEC/ClassicGECTSWrapper/Scripts/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "worker-loader*" {
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();
     }

ClassicGEC/ClassicGECTSWrapper_Samples/Compile/app.ts

@@ -1,4 +1,7 @@
-import ClassicGEC from "../../ClassicGECTSWrapper/Scripts/ClassicGEC";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+import ClassicGEC from "../../ClassicGECTSWrapper/Scripts/ClassicGEC";
 import * as CRNInterfaces from "../../../CRNEngine/CRNEngineTSWrapper/Scripts/Interfaces";
 import "../samples.css"
 

ClassicGEC/ClassicGECTSWrapper_Samples/declarations.d.ts

@@ -1,4 +1,7 @@
-declare module "raw-loader*"
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+declare module "raw-loader*"
 declare module "worker-loader*" {
     class WebpackWorker extends Worker {
         constructor();

ClassicGEC/ClassicGECTSWrapper_Samples/webpack.config.js

@@ -1,4 +1,7 @@
-"use strict";
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
+"use strict";
 var webpack = require('webpack');
 var HtmlWebpackPlugin = require('html-webpack-plugin');
 var CleanWebpackPlugin = require('clean-webpack-plugin');

ClassicGEC/SBOLJsonToXml/json2xml.js

@@ -1,3 +1,6 @@
+// Copyright (c) Microsoft Corporation.
+// Licensed under the MIT License.
+
 var fs = require('fs');
 var SBOLDocument = require('sboljs');
 

Scripts/copyright_notices.fsx

@@ -4,7 +4,7 @@
 open System.IO
 
 (* This script checks whether copyright notices have been added to all source files, inserting where necessary. *)
-let skip_directories = ["node_modules"; "Lib"; "bin"; "obj"]
+let skip_directories = ["node_modules"; "Lib"; "bin"; "obj"; "paket-files"]
 let enumerateIncludedDirectories dir = 
     Directory.EnumerateDirectories dir 
     |> Seq.filter(fun d -> 
@@ -23,11 +23,11 @@ let update notice file =
         printfn "Updating %s" file
         File.WriteAllText (file, notice + "\n" + contents)
 
-// C-style comments (.fs, .fsi, .h, .cpp)
+// C-style comments (.fs, .fsi, .h, .cpp, .ts, .js)
 let cNotice = """// Copyright (c) Microsoft Corporation.
 // Licensed under the MIT License.
 """
 
-let cFiles = ["fs"; "fsi"; "cpp"; "h"] |> Seq.collect (fun ext -> getAllFiles "." ("*." + ext))
+let cFiles = ["fs"; "fsi"; "cpp"; "h"; "ts"; "js"] |> Seq.collect (fun ext -> getAllFiles "." ("*." + ext))
 for file in cFiles do
     update cNotice file