зеркало из https://github.com/microsoft/masc.git
moving spark to connector, removing duplication iterator, moving main license file to apache
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LICENSE
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@ -1,21 +1,202 @@
|
|||
MIT License
|
||||
|
||||
Copyright (c) Microsoft Corporation.
|
||||
Apache License
|
||||
Version 2.0, January 2004
|
||||
http://www.apache.org/licenses/
|
||||
|
||||
Permission is hereby granted, free of charge, to any person obtaining a copy
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@ -1,63 +0,0 @@
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<?xml version="1.0" encoding="UTF-8"?>
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||||
<!--
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||||
Licensed to the Apache Software Foundation (ASF) under one or more
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contributor license agreements. See the NOTICE file distributed with
|
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this work for additional information regarding copyright ownership.
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The ASF licenses this file to You under the Apache License, Version 2.0
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(the "License"); you may not use this file except in compliance with
|
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the License. You may obtain a copy of the License at
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http://www.apache.org/licenses/LICENSE-2.0
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Unless required by applicable law or agreed to in writing, software
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distributed under the License is distributed on an "AS IS" BASIS,
|
||||
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
See the License for the specific language governing permissions and
|
||||
limitations under the License.
|
||||
-->
|
||||
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
|
||||
<modelVersion>4.0.0</modelVersion>
|
||||
<groupId>org.apache.accumulo</groupId>
|
||||
<artifactId>accumulo-duplication-iterator</artifactId>
|
||||
<version>1.0.0-SNAPSHOT</version>
|
||||
<name>Accumulo Duplication Iterator</name>
|
||||
<properties>
|
||||
<encoding>UTF-8</encoding>
|
||||
<accumulo.version>2.0.0</accumulo.version>
|
||||
</properties>
|
||||
<dependencies>
|
||||
<dependency>
|
||||
<groupId>org.apache.accumulo</groupId>
|
||||
<artifactId>accumulo-core</artifactId>
|
||||
<version>${accumulo.version}</version>
|
||||
<scope>provided</scope>
|
||||
</dependency>
|
||||
<dependency>
|
||||
<groupId>junit</groupId>
|
||||
<artifactId>junit</artifactId>
|
||||
<version>4.8.1</version>
|
||||
<scope>test</scope>
|
||||
</dependency>
|
||||
</dependencies>
|
||||
<build>
|
||||
<plugins>
|
||||
<plugin>
|
||||
<groupId>org.apache.maven.plugins</groupId>
|
||||
<artifactId>maven-compiler-plugin</artifactId>
|
||||
<version>3.8.1</version>
|
||||
<configuration>
|
||||
<source>1.8</source>
|
||||
<target>1.8</target>
|
||||
</configuration>
|
||||
</plugin>
|
||||
<plugin>
|
||||
<groupId>org.apache.maven.plugins</groupId>
|
||||
<artifactId>maven-surefire-plugin</artifactId>
|
||||
<version>2.22.2</version>
|
||||
<configuration>
|
||||
<trimStackTrace>false</trimStackTrace>
|
||||
</configuration>
|
||||
</plugin>
|
||||
</plugins>
|
||||
</build>
|
||||
</project>
|
|
@ -1,202 +0,0 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one or more
|
||||
* contributor license agreements. See the NOTICE file distributed with
|
||||
* this work for additional information regarding copyright ownership.
|
||||
* The ASF licenses this file to You under the Apache License, Version 2.0
|
||||
* (the "License"); you may not use this file except in compliance with
|
||||
* the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.accumulo.iterator;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Collection;
|
||||
import java.util.HashMap;
|
||||
import java.util.Iterator;
|
||||
import java.util.Map;
|
||||
|
||||
import org.apache.accumulo.core.data.ByteSequence;
|
||||
import org.apache.accumulo.core.data.Key;
|
||||
import org.apache.accumulo.core.data.Range;
|
||||
import org.apache.accumulo.core.data.Value;
|
||||
import org.apache.accumulo.core.iterators.IteratorEnvironment;
|
||||
import org.apache.accumulo.core.iterators.OptionDescriber;
|
||||
import org.apache.accumulo.core.iterators.SortedKeyValueIterator;
|
||||
import org.apache.accumulo.core.util.Pair;
|
||||
import org.apache.hadoop.io.Text;
|
||||
|
||||
public class DuplicationIterator implements SortedKeyValueIterator<Key, Value>, OptionDescriber {
|
||||
public static final String OPTION_COUNT = "count";
|
||||
public static final String OPTION_DELIMITER = "delimiter";
|
||||
// TODO
|
||||
// proposed option & feature
|
||||
// - check if delimiter exists in row key
|
||||
// - try to parse duplication count after delimiter
|
||||
// - if the number of digits matches the current number, skip row
|
||||
//
|
||||
// * pro: avoid unwanted execution
|
||||
// * cons: can't distinguish between count 20 and 50, since it has the same
|
||||
// number of digits
|
||||
// private static final String OPTION_CHECK_DELIMITER = "check_delimiter";
|
||||
|
||||
private SortedKeyValueIterator<Key, Value> source;
|
||||
private int targetDuplicationCount;
|
||||
private String keyFormat;
|
||||
|
||||
private Key topKey;
|
||||
private Value topValue;
|
||||
private int currentDuplicationIndex;
|
||||
private String delimiter;
|
||||
|
||||
private Iterator<Pair<Key, Value>> keysIterator;
|
||||
private ArrayList<Pair<Key, Value>> keys = new ArrayList<>();
|
||||
|
||||
@Override
|
||||
public void init(SortedKeyValueIterator<Key, Value> source, Map<String, String> options, IteratorEnvironment env)
|
||||
throws IOException {
|
||||
this.source = source;
|
||||
this.targetDuplicationCount = Integer.parseInt(options.getOrDefault(OPTION_COUNT, "1"));
|
||||
this.delimiter = options.getOrDefault(OPTION_DELIMITER, "_");
|
||||
|
||||
int digits = (int) (Math.log10(targetDuplicationCount) + 1);
|
||||
this.keyFormat = "%s%s%0" + digits + "d";
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean hasTop() {
|
||||
return topKey != null;
|
||||
}
|
||||
|
||||
private void prepKeys() throws IOException {
|
||||
if (keysIterator != null) {
|
||||
// current iterator still has values
|
||||
if (keysIterator.hasNext()) {
|
||||
setTop(keysIterator.next());
|
||||
return;
|
||||
}
|
||||
|
||||
// should we duplicate more?
|
||||
if (currentDuplicationIndex < targetDuplicationCount) {
|
||||
currentDuplicationIndex++;
|
||||
|
||||
keysIterator = keys.iterator();
|
||||
setTop(keysIterator.next());
|
||||
|
||||
return;
|
||||
}
|
||||
|
||||
keys.clear();
|
||||
}
|
||||
|
||||
do {
|
||||
if (!source.hasTop())
|
||||
return;
|
||||
|
||||
Text currentRow = new Text(source.getTopKey().getRow());
|
||||
|
||||
while (source.hasTop() && source.getTopKey().getRow().equals(currentRow)) {
|
||||
// collect all cells
|
||||
keys.add(new Pair<Key, Value>(new Key(source.getTopKey()), new Value(source.getTopValue())));
|
||||
|
||||
// move forward
|
||||
source.next();
|
||||
}
|
||||
} while (keys.isEmpty());
|
||||
|
||||
currentDuplicationIndex = 0;
|
||||
|
||||
keysIterator = keys.iterator();
|
||||
setTop(keysIterator.next());
|
||||
|
||||
// ### source data
|
||||
// row key, column family, column qualifier, value
|
||||
// abc, cf1, cq1, v1 -> abc00, abc01, ... abc09
|
||||
// abc, cf2, cq1, v2
|
||||
// def, cf1, cq1, v3
|
||||
|
||||
// ### output data
|
||||
// abc, cf1, cq1, v1 <--
|
||||
// abc, cf2, cq1, v2 <--
|
||||
// abc00, cf1, cq1, v1 <-- dups start
|
||||
// abc00, cf2, cq1, v2
|
||||
}
|
||||
|
||||
@Override
|
||||
public void next() throws IOException {
|
||||
topKey = null;
|
||||
topValue = null;
|
||||
|
||||
prepKeys();
|
||||
}
|
||||
|
||||
@Override
|
||||
public void seek(Range range, Collection<ByteSequence> columnFamilies, boolean inclusive) throws IOException {
|
||||
this.source.seek(range, columnFamilies, inclusive);
|
||||
|
||||
prepKeys();
|
||||
}
|
||||
|
||||
private void setTop(Pair<Key, Value> top) {
|
||||
// form new key by appending currentDuplicationIndex
|
||||
String row = top.getFirst().getRow().toString();
|
||||
|
||||
this.topKey = new Key(new Text(String.format(keyFormat, row, delimiter, currentDuplicationIndex)),
|
||||
top.getFirst().getColumnFamily(), top.getFirst().getColumnQualifier());
|
||||
this.topValue = top.getSecond();
|
||||
}
|
||||
|
||||
@Override
|
||||
public Key getTopKey() {
|
||||
return topKey;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Value getTopValue() {
|
||||
return topValue;
|
||||
}
|
||||
|
||||
@Override
|
||||
public SortedKeyValueIterator<Key, Value> deepCopy(IteratorEnvironment env) {
|
||||
DuplicationIterator copy = new DuplicationIterator();
|
||||
copy.source = source;
|
||||
copy.targetDuplicationCount = targetDuplicationCount;
|
||||
copy.keyFormat = keyFormat;
|
||||
|
||||
// skipping current
|
||||
|
||||
return copy;
|
||||
}
|
||||
|
||||
@Override
|
||||
public IteratorOptions describeOptions() {
|
||||
HashMap<String, String> namedOptions = new HashMap<>();
|
||||
namedOptions.put(OPTION_COUNT, "Number of duplicates rows to produce");
|
||||
namedOptions.put(OPTION_DELIMITER, "Delimiter to use between row key and duplication index");
|
||||
|
||||
return new IteratorOptions(getClass().getSimpleName(),
|
||||
"Duplicates values by appending an index to each row key", namedOptions, null);
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean validateOptions(Map<String, String> options) {
|
||||
String count = options.get(OPTION_COUNT);
|
||||
if (count != null) {
|
||||
try {
|
||||
Integer.parseInt(count);
|
||||
} catch (NumberFormatException ne) {
|
||||
return false;
|
||||
}
|
||||
}
|
||||
|
||||
return true;
|
||||
}
|
||||
}
|
|
@ -1,55 +0,0 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one or more
|
||||
* contributor license agreements. See the NOTICE file distributed with
|
||||
* this work for additional information regarding copyright ownership.
|
||||
* The ASF licenses this file to You under the Apache License, Version 2.0
|
||||
* (the "License"); you may not use this file except in compliance with
|
||||
* the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package org.apache.accumulo.iterator;
|
||||
|
||||
import java.io.IOException;
|
||||
|
||||
import org.apache.accumulo.core.conf.AccumuloConfiguration;
|
||||
import org.apache.accumulo.core.conf.DefaultConfiguration;
|
||||
import org.apache.accumulo.core.data.Key;
|
||||
import org.apache.accumulo.core.data.Value;
|
||||
import org.apache.accumulo.core.iterators.IteratorEnvironment;
|
||||
import org.apache.accumulo.core.iterators.SortedKeyValueIterator;
|
||||
import org.apache.accumulo.core.iterators.system.MapFileIterator;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.FileSystem;
|
||||
|
||||
public class DefaultIteratorEnvironment implements IteratorEnvironment {
|
||||
|
||||
AccumuloConfiguration conf;
|
||||
Configuration hadoopConf = new Configuration();
|
||||
|
||||
public DefaultIteratorEnvironment(AccumuloConfiguration conf) {
|
||||
this.conf = conf;
|
||||
}
|
||||
|
||||
public DefaultIteratorEnvironment() {
|
||||
this.conf = DefaultConfiguration.getInstance();
|
||||
}
|
||||
|
||||
@Deprecated
|
||||
@Override
|
||||
public SortedKeyValueIterator<Key, Value> reserveMapFileReader(String mapFileName) throws IOException {
|
||||
FileSystem fs = FileSystem.get(hadoopConf);
|
||||
return new MapFileIterator(fs, mapFileName, hadoopConf);
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean isSamplingEnabled() {
|
||||
return false;
|
||||
}
|
||||
}
|
|
@ -1,96 +0,0 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one or more
|
||||
* contributor license agreements. See the NOTICE file distributed with
|
||||
* this work for additional information regarding copyright ownership.
|
||||
* The ASF licenses this file to You under the Apache License, Version 2.0
|
||||
* (the "License"); you may not use this file except in compliance with
|
||||
* the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.accumulo.iterator;
|
||||
|
||||
import static org.junit.Assert.assertArrayEquals;
|
||||
import static org.junit.Assert.assertTrue;
|
||||
import static org.junit.Assert.assertFalse;
|
||||
import static org.junit.Assert.assertEquals;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.HashMap;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.SortedMap;
|
||||
import java.util.HashSet;
|
||||
import java.util.TreeMap;
|
||||
import java.util.Collection;
|
||||
|
||||
import org.apache.accumulo.core.data.Key;
|
||||
import org.apache.accumulo.core.data.Range;
|
||||
import org.apache.accumulo.core.data.Value;
|
||||
import org.apache.accumulo.core.data.ByteSequence;
|
||||
import org.apache.accumulo.core.iterators.SortedMapIterator;
|
||||
import org.junit.Test;
|
||||
|
||||
public class DuplicationIteratorTest {
|
||||
private static final Collection<ByteSequence> EMPTY_SET = new HashSet<>();
|
||||
|
||||
@Test
|
||||
public void testDuplication() throws IOException {
|
||||
SortedMap<Key, Value> map = new TreeMap<>();
|
||||
map.put(new Key("key1", "cf1", "cq1"), new Value("Hello"));
|
||||
map.put(new Key("key1", "cf2", ""), new Value("abc"));
|
||||
|
||||
map.put(new Key("key2", "cf2"), new Value("def"));
|
||||
|
||||
SortedMapIterator parentIterator = new SortedMapIterator(map);
|
||||
DuplicationIterator iterator = new DuplicationIterator();
|
||||
|
||||
Map<String, String> options = new HashMap<>();
|
||||
options.put(DuplicationIterator.OPTION_COUNT, "2");
|
||||
|
||||
iterator.init(parentIterator, options, new DefaultIteratorEnvironment());
|
||||
iterator.seek(new Range(), EMPTY_SET, false);
|
||||
|
||||
String[] expectedStrings = {
|
||||
// key 1 (0)
|
||||
"key1_0 cf1 cq1 Hello",
|
||||
// key 1 (0)
|
||||
"key1_0 cf2 abc",
|
||||
// key 1 (1)
|
||||
"key1_1 cf1 cq1 Hello",
|
||||
// key 1 (1)
|
||||
"key1_1 cf2 abc",
|
||||
// key 1 (2)
|
||||
"key1_2 cf1 cq1 Hello",
|
||||
// key 1 (2)
|
||||
"key1_2 cf2 abc",
|
||||
// key 2 (0)
|
||||
"key2_0 cf2 def",
|
||||
// key 2 (1)
|
||||
"key2_1 cf2 def",
|
||||
// key 2 (2)
|
||||
"key2_2 cf2 def" };
|
||||
|
||||
for (int i = 0; i < expectedStrings.length; i++) {
|
||||
assertTrue(iterator.hasTop());
|
||||
|
||||
String actual = String.format("%s %s %s %s", iterator.getTopKey().getRow().toString(),
|
||||
iterator.getTopKey().getColumnFamily().toString(),
|
||||
iterator.getTopKey().getColumnQualifier().toString(), iterator.getTopValue().toString());
|
||||
|
||||
assertEquals(expectedStrings[i], actual);
|
||||
|
||||
iterator.next();
|
||||
}
|
||||
|
||||
assertFalse(iterator.hasTop());
|
||||
}
|
||||
}
|
Загрузка…
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