Add SQLAlchemy's tests and fill in some features

This commit is contained in:
Jing Wang 2014-03-23 23:47:54 -07:00
Родитель d770514f85
Коммит ce75d3e23f
13 изменённых файлов: 1011 добавлений и 123 удалений

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@ -3,5 +3,5 @@ pytest
pytest-cov
requests>=1.0.0
sasl>=0.1.3
sqlalchemy>=0.5.0
sqlalchemy>=0.9.4
thrift>=0.8.0

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@ -123,6 +123,9 @@ class Connection(object):
def sessionHandle(self):
return self._sessionHandle
def rollback(self):
raise NotSupportedError("Hive does not have transactions")
class Cursor(common.DBAPICursor):
"""These objects represent a database cursor, which is used to manage the context of a fetch

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@ -58,6 +58,9 @@ class Connection(object):
"""Return a new :py:class:`Cursor` object using the connection."""
return Cursor(*self._args, **self._kwargs)
def rollback(self):
raise NotSupportedError("Presto does not have transactions")
class Cursor(common.DBAPICursor):
"""These objects represent a database cursor, which is used to manage the context of a fetch

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@ -0,0 +1,631 @@
# Taken from SQLAlchemy with lots of stuff stripped out.
# sqlalchemy/processors.py
# Copyright (C) 2010-2013 the SQLAlchemy authors and contributors <see AUTHORS file>
# Copyright (C) 2010 Gaetan de Menten gdementen@gmail.com
#
# This module is part of SQLAlchemy and is released under
# the MIT License: http://www.opensource.org/licenses/mit-license.php
"""defines generic type conversion functions, as used in bind and result
processors.
They all share one common characteristic: None is passed through unchanged.
"""
import datetime
import re
def str_to_datetime_processor_factory(regexp, type_):
rmatch = regexp.match
# Even on python2.6 datetime.strptime is both slower than this code
# and it does not support microseconds.
has_named_groups = bool(regexp.groupindex)
def process(value):
if value is None:
return None
else:
try:
m = rmatch(value)
except TypeError:
raise ValueError("Couldn't parse %s string '%r' "
"- value is not a string." %
(type_.__name__, value))
if m is None:
raise ValueError("Couldn't parse %s string: "
"'%s'" % (type_.__name__, value))
if has_named_groups:
groups = m.groupdict(0)
return type_(**dict(zip(groups.iterkeys(),
map(int, groups.itervalues()))))
else:
return type_(*map(int, m.groups(0)))
return process
DATETIME_RE = re.compile("(\d+)-(\d+)-(\d+) (\d+):(\d+):(\d+)(?:\.(\d+))?")
str_to_datetime = str_to_datetime_processor_factory(DATETIME_RE,
datetime.datetime)
# engine/reflection.py
# Copyright (C) 2005-2014 the SQLAlchemy authors and contributors <see AUTHORS file>
#
# This module is part of SQLAlchemy and is released under
# the MIT License: http://www.opensource.org/licenses/mit-license.php
"""Provides an abstraction for obtaining database schema information.
Usage Notes:
Here are some general conventions when accessing the low level inspector
methods such as get_table_names, get_columns, etc.
1. Inspector methods return lists of dicts in most cases for the following
reasons:
* They're both standard types that can be serialized.
* Using a dict instead of a tuple allows easy expansion of attributes.
* Using a list for the outer structure maintains order and is easy to work
with (e.g. list comprehension [d['name'] for d in cols]).
2. Records that contain a name, such as the column name in a column record
use the key 'name'. So for most return values, each record will have a
'name' attribute..
"""
from sqlalchemy import exc, sql
from sqlalchemy import schema as sa_schema
from sqlalchemy import util
from sqlalchemy.types import TypeEngine
from sqlalchemy.util import deprecated
@util.decorator
def cache(fn, self, con, *args, **kw):
info_cache = kw.get('info_cache', None)
if info_cache is None:
return fn(self, con, *args, **kw)
key = (
fn.__name__,
tuple(a for a in args if isinstance(a, util.string_types)),
tuple((k, v) for k, v in kw.items() if
isinstance(v,
util.string_types + util.int_types + (float, )
)
)
)
ret = info_cache.get(key)
if ret is None:
ret = fn(self, con, *args, **kw)
info_cache[key] = ret
return ret
class Inspector(object):
"""Performs database schema inspection.
The Inspector acts as a proxy to the reflection methods of the
:class:`~sqlalchemy.engine.interfaces.Dialect`, providing a
consistent interface as well as caching support for previously
fetched metadata.
A :class:`.Inspector` object is usually created via the
:func:`.inspect` function::
from sqlalchemy import inspect, create_engine
engine = create_engine('...')
insp = inspect(engine)
The inspection method above is equivalent to using the
:meth:`.Inspector.from_engine` method, i.e.::
engine = create_engine('...')
insp = Inspector.from_engine(engine)
Where above, the :class:`~sqlalchemy.engine.interfaces.Dialect` may opt
to return an :class:`.Inspector` subclass that provides additional
methods specific to the dialect's target database.
"""
def __init__(self, bind):
"""Initialize a new :class:`.Inspector`.
:param bind: a :class:`~sqlalchemy.engine.Connectable`,
which is typically an instance of
:class:`~sqlalchemy.engine.Engine` or
:class:`~sqlalchemy.engine.Connection`.
For a dialect-specific instance of :class:`.Inspector`, see
:meth:`.Inspector.from_engine`
"""
# this might not be a connection, it could be an engine.
self.bind = bind
# set the engine
if hasattr(bind, 'engine'):
self.engine = bind.engine
else:
self.engine = bind
if self.engine is bind:
# if engine, ensure initialized
bind.connect().close()
self.dialect = self.engine.dialect
self.info_cache = {}
@classmethod
def from_engine(cls, bind):
"""Construct a new dialect-specific Inspector object from the given
engine or connection.
:param bind: a :class:`~sqlalchemy.engine.Connectable`,
which is typically an instance of
:class:`~sqlalchemy.engine.Engine` or
:class:`~sqlalchemy.engine.Connection`.
This method differs from direct a direct constructor call of
:class:`.Inspector` in that the
:class:`~sqlalchemy.engine.interfaces.Dialect` is given a chance to
provide a dialect-specific :class:`.Inspector` instance, which may
provide additional methods.
See the example at :class:`.Inspector`.
"""
if hasattr(bind.dialect, 'inspector'):
return bind.dialect.inspector(bind)
return Inspector(bind)
@property
def default_schema_name(self):
"""Return the default schema name presented by the dialect
for the current engine's database user.
E.g. this is typically ``public`` for Postgresql and ``dbo``
for SQL Server.
"""
return self.dialect.default_schema_name
def get_schema_names(self):
"""Return all schema names.
"""
if hasattr(self.dialect, 'get_schema_names'):
return self.dialect.get_schema_names(self.bind,
info_cache=self.info_cache)
return []
def get_table_names(self, schema=None, order_by=None):
"""Return all table names in referred to within a particular schema.
The names are expected to be real tables only, not views.
Views are instead returned using the :meth:`.Inspector.get_view_names`
method.
:param schema: Schema name. If ``schema`` is left at ``None``, the
database's default schema is
used, else the named schema is searched. If the database does not
support named schemas, behavior is undefined if ``schema`` is not
passed as ``None``. For special quoting, use :class:`.quoted_name`.
:param order_by: Optional, may be the string "foreign_key" to sort
the result on foreign key dependencies.
.. versionchanged:: 0.8 the "foreign_key" sorting sorts tables
in order of dependee to dependent; that is, in creation
order, rather than in drop order. This is to maintain
consistency with similar features such as
:attr:`.MetaData.sorted_tables` and :func:`.util.sort_tables`.
.. seealso::
:attr:`.MetaData.sorted_tables`
"""
if hasattr(self.dialect, 'get_table_names'):
tnames = self.dialect.get_table_names(self.bind,
schema, info_cache=self.info_cache)
else:
tnames = self.engine.table_names(schema)
if order_by == 'foreign_key':
raise NotImplementedError("taken out during backport")
return tnames
def get_table_options(self, table_name, schema=None, **kw):
"""Return a dictionary of options specified when the table of the
given name was created.
This currently includes some options that apply to MySQL tables.
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
"""
if hasattr(self.dialect, 'get_table_options'):
return self.dialect.get_table_options(
self.bind, table_name, schema,
info_cache=self.info_cache, **kw)
return {}
def get_view_names(self, schema=None):
"""Return all view names in `schema`.
:param schema: Optional, retrieve names from a non-default schema.
For special quoting, use :class:`.quoted_name`.
"""
return self.dialect.get_view_names(self.bind, schema,
info_cache=self.info_cache)
def get_view_definition(self, view_name, schema=None):
"""Return definition for `view_name`.
:param schema: Optional, retrieve names from a non-default schema.
For special quoting, use :class:`.quoted_name`.
"""
return self.dialect.get_view_definition(
self.bind, view_name, schema, info_cache=self.info_cache)
def get_columns(self, table_name, schema=None, **kw):
"""Return information about columns in `table_name`.
Given a string `table_name` and an optional string `schema`, return
column information as a list of dicts with these keys:
name
the column's name
type
:class:`~sqlalchemy.types.TypeEngine`
nullable
boolean
default
the column's default value
attrs
dict containing optional column attributes
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
"""
col_defs = self.dialect.get_columns(self.bind, table_name, schema,
info_cache=self.info_cache,
**kw)
for col_def in col_defs:
# make this easy and only return instances for coltype
coltype = col_def['type']
if not isinstance(coltype, TypeEngine):
col_def['type'] = coltype()
return col_defs
@deprecated('0.7', 'Call to deprecated method get_primary_keys.'
' Use get_pk_constraint instead.')
def get_primary_keys(self, table_name, schema=None, **kw):
"""Return information about primary keys in `table_name`.
Given a string `table_name`, and an optional string `schema`, return
primary key information as a list of column names.
"""
return self.dialect.get_pk_constraint(self.bind, table_name, schema,
info_cache=self.info_cache,
**kw)['constrained_columns']
def get_pk_constraint(self, table_name, schema=None, **kw):
"""Return information about primary key constraint on `table_name`.
Given a string `table_name`, and an optional string `schema`, return
primary key information as a dictionary with these keys:
constrained_columns
a list of column names that make up the primary key
name
optional name of the primary key constraint.
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
"""
return self.dialect.get_pk_constraint(self.bind, table_name, schema,
info_cache=self.info_cache,
**kw)
def get_foreign_keys(self, table_name, schema=None, **kw):
"""Return information about foreign_keys in `table_name`.
Given a string `table_name`, and an optional string `schema`, return
foreign key information as a list of dicts with these keys:
constrained_columns
a list of column names that make up the foreign key
referred_schema
the name of the referred schema
referred_table
the name of the referred table
referred_columns
a list of column names in the referred table that correspond to
constrained_columns
name
optional name of the foreign key constraint.
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
"""
return self.dialect.get_foreign_keys(self.bind, table_name, schema,
info_cache=self.info_cache,
**kw)
def get_indexes(self, table_name, schema=None, **kw):
"""Return information about indexes in `table_name`.
Given a string `table_name` and an optional string `schema`, return
index information as a list of dicts with these keys:
name
the index's name
column_names
list of column names in order
unique
boolean
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
"""
return self.dialect.get_indexes(self.bind, table_name,
schema,
info_cache=self.info_cache, **kw)
def get_unique_constraints(self, table_name, schema=None, **kw):
"""Return information about unique constraints in `table_name`.
Given a string `table_name` and an optional string `schema`, return
unique constraint information as a list of dicts with these keys:
name
the unique constraint's name
column_names
list of column names in order
:param table_name: string name of the table. For special quoting,
use :class:`.quoted_name`.
:param schema: string schema name; if omitted, uses the default schema
of the database connection. For special quoting,
use :class:`.quoted_name`.
.. versionadded:: 0.8.4
"""
return self.dialect.get_unique_constraints(
self.bind, table_name, schema, info_cache=self.info_cache, **kw)
def reflecttable(self, table, include_columns, exclude_columns=()):
"""Given a Table object, load its internal constructs based on
introspection.
This is the underlying method used by most dialects to produce
table reflection. Direct usage is like::
from sqlalchemy import create_engine, MetaData, Table
from sqlalchemy.engine import reflection
engine = create_engine('...')
meta = MetaData()
user_table = Table('user', meta)
insp = Inspector.from_engine(engine)
insp.reflecttable(user_table, None)
:param table: a :class:`~sqlalchemy.schema.Table` instance.
:param include_columns: a list of string column names to include
in the reflection process. If ``None``, all columns are reflected.
"""
dialect = self.bind.dialect
# table attributes we might need.
reflection_options = {}
schema = table.schema
table_name = table.name
# apply table options
tbl_opts = self.get_table_options(table_name, schema, **table.kwargs)
if tbl_opts:
table.kwargs.update(tbl_opts)
# table.kwargs will need to be passed to each reflection method. Make
# sure keywords are strings.
tblkw = table.kwargs.copy()
for (k, v) in list(tblkw.items()):
del tblkw[k]
tblkw[str(k)] = v
if isinstance(schema, str):
schema = schema.decode(dialect.encoding)
if isinstance(table_name, str):
table_name = table_name.decode(dialect.encoding)
# columns
found_table = False
cols_by_orig_name = {}
for col_d in self.get_columns(table_name, schema, **tblkw):
found_table = True
orig_name = col_d['name']
name = col_d['name']
if include_columns and name not in include_columns:
continue
if exclude_columns and name in exclude_columns:
continue
coltype = col_d['type']
col_kw = {
'nullable': col_d['nullable'],
}
for k in ('autoincrement', 'quote', 'info', 'key'):
if k in col_d:
col_kw[k] = col_d[k]
colargs = []
if col_d.get('default') is not None:
# the "default" value is assumed to be a literal SQL
# expression, so is wrapped in text() so that no quoting
# occurs on re-issuance.
colargs.append(
sa_schema.DefaultClause(
sql.text(col_d['default']), _reflected=True
)
)
if 'sequence' in col_d:
# TODO: mssql and sybase are using this.
seq = col_d['sequence']
sequence = sa_schema.Sequence(seq['name'], 1, 1)
if 'start' in seq:
sequence.start = seq['start']
if 'increment' in seq:
sequence.increment = seq['increment']
colargs.append(sequence)
cols_by_orig_name[orig_name] = col = \
sa_schema.Column(name, coltype, *colargs, **col_kw)
table.append_column(col)
if not found_table:
raise exc.NoSuchTableError(table.name)
# Primary keys
pk_cons = self.get_pk_constraint(table_name, schema, **tblkw)
if pk_cons:
pk_cols = [
cols_by_orig_name[pk]
for pk in pk_cons['constrained_columns']
if pk in cols_by_orig_name and pk not in exclude_columns
]
pk_cols += [
pk
for pk in table.primary_key
if pk.key in exclude_columns
]
primary_key_constraint = sa_schema.PrimaryKeyConstraint(
name=pk_cons.get('name'),
*pk_cols
)
table.append_constraint(primary_key_constraint)
# Foreign keys
fkeys = self.get_foreign_keys(table_name, schema, **tblkw)
for fkey_d in fkeys:
conname = fkey_d['name']
# look for columns by orig name in cols_by_orig_name,
# but support columns that are in-Python only as fallback
constrained_columns = [
cols_by_orig_name[c].key
if c in cols_by_orig_name else c
for c in fkey_d['constrained_columns']
]
if exclude_columns and set(constrained_columns).intersection(
exclude_columns):
continue
referred_schema = fkey_d['referred_schema']
referred_table = fkey_d['referred_table']
referred_columns = fkey_d['referred_columns']
refspec = []
if referred_schema is not None:
sa_schema.Table(referred_table, table.metadata,
autoload=True, schema=referred_schema,
autoload_with=self.bind,
**reflection_options
)
for column in referred_columns:
refspec.append(".".join(
[referred_schema, referred_table, column]))
else:
sa_schema.Table(referred_table, table.metadata, autoload=True,
autoload_with=self.bind,
**reflection_options
)
for column in referred_columns:
refspec.append(".".join([referred_table, column]))
if 'options' in fkey_d:
options = fkey_d['options']
else:
options = {}
table.append_constraint(
sa_schema.ForeignKeyConstraint(constrained_columns, refspec,
conname, link_to_name=True,
**options))
# Indexes
indexes = self.get_indexes(table_name, schema)
for index_d in indexes:
name = index_d['name']
columns = index_d['column_names']
unique = index_d['unique']
flavor = index_d.get('type', 'unknown type')
if include_columns and \
not set(columns).issubset(include_columns):
util.warn(
"Omitting %s KEY for (%s), key covers omitted columns." %
(flavor, ', '.join(columns)))
continue
# look for columns by orig name in cols_by_orig_name,
# but support columns that are in-Python only as fallback
sa_schema.Index(name, *[
cols_by_orig_name[c] if c in cols_by_orig_name
else table.c[c]
for c in columns
],
**dict(unique=unique))

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@ -7,21 +7,26 @@ which is released under the MIT license.
from __future__ import absolute_import
from __future__ import unicode_literals
from distutils.version import StrictVersion
from pyhive import hive
from sqlalchemy.sql import compiler
from sqlalchemy import exc
from sqlalchemy import schema
from sqlalchemy import types
from sqlalchemy import util
from sqlalchemy.databases import mysql
from sqlalchemy.engine import default
from sqlalchemy.sql import compiler
import decimal
import re
import sqlalchemy
try:
from sqlalchemy import processors
except ImportError:
from pyhive import sqlalchemy_processors as processors
from pyhive import sqlalchemy_backports as processors
try:
from sqlalchemy.sql.compiler import SQLCompiler
except ImportError:
from sqlalchemy.sql.compiler import DefaultCompiler as SQLCompiler
class HiveStringTypeBase(types.TypeDecorator):
@ -338,10 +343,28 @@ _type_map = {
}
class HiveCompiler(SQLCompiler):
def visit_concat_op_binary(self, binary, operator, **kw):
return "concat(%s, %s)" % (self.process(binary.left), self.process(binary.right))
if StrictVersion(sqlalchemy.__version__) >= StrictVersion('0.6.0'):
class HiveTypeCompiler(compiler.GenericTypeCompiler):
def visit_INTEGER(self, type_):
return 'INT'
def visit_CHAR(self, type_):
return 'STRING'
def visit_VARCHAR(self, type_):
return 'STRING'
class HiveDialect(default.DefaultDialect):
name = 'hive'
driver = 'thrift'
name = b'hive'
driver = b'thrift'
preparer = HiveIdentifierPreparer
statement_compiler = HiveCompiler
supports_alter = True
supports_pk_autoincrement = False
supports_default_values = False
@ -371,53 +394,99 @@ class HiveDialect(default.DefaultDialect):
kwargs.update(url.query)
return ([], kwargs)
def reflecttable(self, connection, table, include_columns=None, exclude_columns=None):
exclude_columns = exclude_columns or []
def get_schema_names(self, connection, **kw):
# Equivalent to SHOW DATABASES
return [row.database_name for row in connection.execute('SHOW SCHEMAS')]
def _get_table_columns(self, connection, table_name, schema):
full_table = table_name
if schema:
full_table = schema + '.' + table_name
# TODO using TGetColumnsReq hangs after sending TFetchResultsReq.
# Using DESCRIBE works but is uglier.
try:
# This needs the table name to be unescaped (no backticks).
rows = connection.execute('DESCRIBE {}'.format(table)).fetchall()
rows = connection.execute('DESCRIBE {}'.format(full_table)).fetchall()
except exc.OperationalError as e:
# Does the table exist?
regex_fmt = r'TExecuteStatementResp.*SemanticException.*Table not found {}'
regex = regex_fmt.format(re.escape(table.name))
regex = regex_fmt.format(re.escape(full_table))
if re.search(regex, e.message):
raise exc.NoSuchTableError(table.name)
raise exc.NoSuchTableError(full_table)
else:
raise
else:
# Strip whitespace
rows = [[col.strip() if col else None for col in row] for row in rows]
# Filter out empty rows and comment
rows = [row for row in rows if row[0] and row[0] != '# col_name']
for i, (col_name, col_type, _comment) in enumerate(rows):
if col_name == '# Partition Information':
break
# Take out the more detailed type information
# e.g. 'map<int,int>' -> 'map'
col_type = col_type.partition('<')[0]
if include_columns is not None and col_name not in include_columns:
continue
if col_name in exclude_columns:
continue
try:
coltype = _type_map[col_type]
except KeyError:
util.warn("Did not recognize type '%s' of column '%s'" % (
col_type, col_name))
coltype = types.NullType
table.append_column(schema.Column(
name=col_name,
type_=coltype,
))
# Handle partition columns
for col_name, col_type, _comment in rows[i + 1:]:
if include_columns is not None and col_name not in include_columns:
continue
if col_name in exclude_columns:
continue
getattr(table.c, col_name).index = True
# Hive is stupid: this is what I get from DESCRIBE some_schema.does_not_exist
regex = r'Table .* does not exist'
if len(rows) == 1 and re.match(regex, rows[0].col_name):
raise exc.NoSuchTableError(full_table)
return rows
def has_table(self, connection, table_name, schema=None):
try:
self._get_table_columns(connection, table_name, schema)
return True
except exc.NoSuchTableError:
return False
def get_columns(self, connection, table_name, schema=None, **kw):
rows = self._get_table_columns(connection, table_name, schema)
# Strip whitespace
rows = [[col.strip() if col else None for col in row] for row in rows]
# Filter out empty rows and comment
rows = [row for row in rows if row[0] and row[0] != '# col_name']
result = []
for (col_name, col_type, _comment) in rows:
if col_name == '# Partition Information':
break
# Take out the more detailed type information
# e.g. 'map<int,int>' -> 'map'
col_type = col_type.partition('<')[0]
try:
coltype = _type_map[col_type]
except KeyError:
util.warn("Did not recognize type '%s' of column '%s'" % (
col_type, col_name))
coltype = types.NullType
result.append({
'name': col_name,
'type': coltype,
'nullable': True,
'default': None,
})
return result
def get_foreign_keys(self, connection, table_name, schema=None, **kw):
# Hive has no support for foreign keys.
return []
def get_pk_constraint(self, connection, table_name, schema=None, **kw):
# Hive has no support for primary keys.
return []
def get_indexes(self, connection, table_name, schema=None, **kw):
rows = self._get_table_columns(connection, table_name, schema)
# Strip whitespace
rows = [[col.strip() if col else None for col in row] for row in rows]
# Filter out empty rows and comment
rows = [row for row in rows if row[0] and row[0] != '# col_name']
for i, (col_name, _col_type, _comment) in enumerate(rows):
if col_name == '# Partition Information':
break
# Handle partition columns
col_names = []
for col_name, _col_type, _comment in rows[i + 1:]:
col_names.append(col_name)
if col_names:
return [{'name': 'partition', 'column_names': col_names, 'unique': False}]
else:
return []
def get_table_names(self, connection, schema=None, **kw):
query = 'SHOW TABLES'
if schema:
query += ' IN ' + self.identifier_preparer.quote_identifier(schema)
return [row.tab_name for row in connection.execute(query)]
def do_rollback(self, dbapi_connection):
# No transactions for Hive
@ -430,3 +499,13 @@ class HiveDialect(default.DefaultDialect):
def _check_unicode_description(self, connection):
# We decode everything as UTF-8
return True
if StrictVersion(sqlalchemy.__version__) < StrictVersion('0.6.0'):
from pyhive import sqlalchemy_backports
def reflecttable(self, connection, table, include_columns=None, exclude_columns=None):
insp = sqlalchemy_backports.Inspector.from_engine(connection)
return insp.reflecttable(table, include_columns, exclude_columns)
HiveDialect.reflecttable = reflecttable
else:
HiveDialect.type_compiler = HiveTypeCompiler

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@ -7,14 +7,15 @@ which is released under the MIT license.
from __future__ import absolute_import
from __future__ import unicode_literals
from distutils.version import StrictVersion
from pyhive import presto
from sqlalchemy import exc
from sqlalchemy import schema
from sqlalchemy import types
from sqlalchemy import util
from sqlalchemy.engine import default
from sqlalchemy.sql import compiler
import re
import sqlalchemy
class PrestoIdentifierPreparer(compiler.IdentifierPreparer):
@ -147,10 +148,12 @@ class PrestoDialect(default.DefaultDialect):
raise ValueError("Unexpected database format {}".format(url.database))
return ([], kwargs)
def reflecttable(self, connection, table, include_columns=None, exclude_columns=None):
exclude_columns = exclude_columns or []
def _get_table_columns(self, connection, table_name, schema):
full_table = self.identifier_preparer.quote_identifier(table_name)
if schema:
full_table = self.identifier_preparer.quote_identifier(schema) + '.' + full_table
try:
rows = connection.execute('SHOW COLUMNS FROM "{}"'.format(table))
return connection.execute('SHOW COLUMNS FROM {}'.format(full_table))
except presto.DatabaseError as e:
# Normally SQLAlchemy should wrap this exception in sqlalchemy.exc.DatabaseError, which
# it successfully does in the Hive version. The difference with Presto is that this
@ -159,29 +162,61 @@ class PrestoDialect(default.DefaultDialect):
# presto.DatabaseError here.
# Does the table exist?
msg = e.message.get('message') if isinstance(e.message, dict) else None
regex = r"^Table\ \'.*{}\'\ does\ not\ exist$".format(re.escape(table.name))
regex = r"^Table\ \'.*{}\'\ does\ not\ exist$".format(re.escape(table_name))
if msg and re.match(regex, msg):
raise exc.NoSuchTableError(table.name)
raise exc.NoSuchTableError(table_name)
else:
raise
def has_table(self, connection, table_name, schema=None):
try:
self._get_table_columns(connection, table_name, schema)
return True
except exc.NoSuchTableError:
return False
def get_columns(self, connection, table_name, schema=None, **kw):
rows = self._get_table_columns(connection, table_name, None)
result = []
for row in rows:
name, coltype, nullable, _is_partition_key = row
try:
coltype = _type_map[coltype]
except KeyError:
util.warn("Did not recognize type '%s' of column '%s'" % (coltype, name))
coltype = types.NullType
result.append({
'name': name,
'type': coltype,
'nullable': nullable,
'default': None,
})
return result
def get_foreign_keys(self, connection, table_name, schema=None, **kw):
# Hive has no support for foreign keys.
return []
def get_pk_constraint(self, connection, table_name, schema=None, **kw):
# Hive has no support for primary keys.
return []
def get_indexes(self, connection, table_name, schema=None, **kw):
rows = self._get_table_columns(connection, table_name, None)
col_names = []
for row in rows:
if row['Partition Key']:
col_names.append(row['Column'])
if col_names:
return [{'name': 'partition', 'column_names': col_names, 'unique': False}]
else:
for row in rows:
name, coltype, nullable, is_partition_key = row
if include_columns is not None and name not in include_columns:
continue
if name in exclude_columns:
continue
try:
coltype = _type_map[coltype]
except KeyError:
util.warn("Did not recognize type '%s' of column '%s'" % (coltype, name))
coltype = types.NullType
table.append_column(schema.Column(
name=name,
type_=coltype,
nullable=nullable,
index=is_partition_key, # Translate Hive partitions to indexes
))
return []
def get_table_names(self, connection, schema=None, **kw):
query = 'SHOW TABLES'
if schema:
query += ' FROM ' + self.identifier_preparer.quote_identifier(schema)
return [row.tab_name for row in connection.execute(query)]
def do_rollback(self, dbapi_connection):
# No transactions for Presto
@ -194,3 +229,11 @@ class PrestoDialect(default.DefaultDialect):
def _check_unicode_description(self, connection):
# requests gives back Unicode strings
return True
if StrictVersion(sqlalchemy.__version__) < StrictVersion('0.6.0'):
from pyhive import sqlalchemy_backports
def reflecttable(self, connection, table, include_columns=None, exclude_columns=None):
insp = sqlalchemy_backports.Inspector.from_engine(connection)
return insp.reflecttable(table, include_columns, exclude_columns)
PrestoDialect.reflecttable = reflecttable

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@ -1,52 +0,0 @@
# Taken from SQLAlchemy with lots of stuff stripped out.
# sqlalchemy/processors.py
# Copyright (C) 2010-2013 the SQLAlchemy authors and contributors <see AUTHORS file>
# Copyright (C) 2010 Gaetan de Menten gdementen@gmail.com
#
# This module is part of SQLAlchemy and is released under
# the MIT License: http://www.opensource.org/licenses/mit-license.php
"""defines generic type conversion functions, as used in bind and result
processors.
They all share one common characteristic: None is passed through unchanged.
"""
import datetime
import re
def str_to_datetime_processor_factory(regexp, type_):
rmatch = regexp.match
# Even on python2.6 datetime.strptime is both slower than this code
# and it does not support microseconds.
has_named_groups = bool(regexp.groupindex)
def process(value):
if value is None:
return None
else:
try:
m = rmatch(value)
except TypeError:
raise ValueError("Couldn't parse %s string '%r' "
"- value is not a string." %
(type_.__name__, value))
if m is None:
raise ValueError("Couldn't parse %s string: "
"'%s'" % (type_.__name__, value))
if has_named_groups:
groups = m.groupdict(0)
return type_(**dict(zip(groups.iterkeys(),
map(int, groups.itervalues()))))
else:
return type_(*map(int, m.groups(0)))
return process
DATETIME_RE = re.compile("(\d+)-(\d+)-(\d+) (\d+):(\d+):(\d+)(?:\.(\d+))?")
str_to_datetime = str_to_datetime_processor_factory(DATETIME_RE,
datetime.datetime)

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@ -3,6 +3,7 @@ from __future__ import absolute_import
from __future__ import unicode_literals
from sqlalchemy import select
from sqlalchemy.exc import NoSuchTableError
from sqlalchemy.schema import Index
from sqlalchemy.schema import MetaData
from sqlalchemy.schema import Table
from sqlalchemy.sql import expression
@ -47,7 +48,8 @@ class SqlAlchemyTestCase(object):
def test_reflect_include_columns(self, engine, connection):
"""When passed include_columns, reflecttable should filter out other columns"""
one_row_complex = Table('one_row_complex', MetaData(bind=engine))
engine.dialect.reflecttable(connection, one_row_complex, include_columns=['int'])
engine.dialect.reflecttable(
connection, one_row_complex, include_columns=['int'], exclude_columns=[])
self.assertEqual(len(one_row_complex.c), 1)
self.assertIsNotNone(one_row_complex.c.int)
self.assertRaises(AttributeError, lambda: one_row_complex.c.tinyint)
@ -57,17 +59,20 @@ class SqlAlchemyTestCase(object):
"""reflecttable should get the partition column as an index"""
many_rows = Table('many_rows', MetaData(bind=engine), autoload=True)
self.assertEqual(len(many_rows.c), 2)
self.assertTrue(many_rows.c.b.index)
self.assertEqual(repr(many_rows.indexes), repr({Index('partition', many_rows.c.b)}))
many_rows = Table('many_rows', MetaData(bind=engine))
engine.dialect.reflecttable(connection, many_rows, include_columns=['a'])
engine.dialect.reflecttable(
connection, many_rows, include_columns=['a'], exclude_columns=[])
self.assertEqual(len(many_rows.c), 1)
self.assertFalse(many_rows.c.a.index)
self.assertFalse(many_rows.indexes)
many_rows = Table('many_rows', MetaData(bind=engine))
engine.dialect.reflecttable(connection, many_rows, include_columns=['b'])
engine.dialect.reflecttable(
connection, many_rows, include_columns=['b'], exclude_columns=[])
self.assertEqual(len(many_rows.c), 1)
self.assertTrue(many_rows.c.b.index)
self.assertEqual(repr(many_rows.indexes), repr({Index('partition', many_rows.c.b)}))
@with_engine_connection
def test_unicode(self, engine, connection):

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@ -0,0 +1,12 @@
from __future__ import absolute_import
from __future__ import unicode_literals
from distutils.version import StrictVersion
import sqlalchemy
if StrictVersion(sqlalchemy.__version__) >= StrictVersion('0.9.4'):
from sqlalchemy.dialects import registry
registry.register("hive", "pyhive.sqlalchemy_hive", "HiveDialect")
registry.register("presto", "pyhive.sqlalchemy_presto", "PrestoDialect")
from sqlalchemy.testing.plugin.pytestplugin import *

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@ -0,0 +1,48 @@
from __future__ import absolute_import
from __future__ import unicode_literals
from sqlalchemy.testing import exclusions
from sqlalchemy.testing.requirements import SuiteRequirements
class Requirements(SuiteRequirements):
@property
def self_referential_foreign_keys(self):
return exclusions.closed()
@property
def index_reflection(self):
return exclusions.closed()
@property
def view_reflection(self):
# Hive supports views, but there's no SHOW VIEWS command, which breaks the tests.
return exclusions.closed()
@property
def foreign_key_constraint_reflection(self):
return exclusions.closed()
@property
def primary_key_constraint_reflection(self):
return exclusions.closed()
@property
def unique_constraint_reflection(self):
return exclusions.closed()
@property
def schemas(self):
return exclusions.open()
@property
def date(self):
# Added in Hive 0.12
return exclusions.closed()
@property
def implements_get_lastrowid(self):
return exclusions.closed()
@property
def views(self):
return exclusions.closed()

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@ -0,0 +1,109 @@
from __future__ import absolute_import
from __future__ import unicode_literals
from distutils.version import StrictVersion
from sqlalchemy import types as sql_types
import sqlalchemy as sa
if StrictVersion(sa.__version__) >= StrictVersion('0.9.4'):
from sqlalchemy.testing import suite
from sqlalchemy.testing.suite import *
class ComponentReflectionTest(suite.ComponentReflectionTest):
@classmethod
def define_reflected_tables(cls, metadata, schema):
users = Table('users', metadata,
Column('user_id', sa.INT),
Column('test1', sa.CHAR(5)),
Column('test2', sa.Float(5)),
schema=schema,
)
Table("dingalings", metadata,
Column('dingaling_id', sa.Integer),
Column('address_id', sa.Integer),
Column('data', sa.String(30)),
schema=schema,
)
Table('email_addresses', metadata,
Column('address_id', sa.Integer),
Column('remote_user_id', sa.Integer),
Column('email_address', sa.String(20)),
schema=schema,
)
if testing.requires.index_reflection.enabled:
cls.define_index(metadata, users)
if testing.requires.view_reflection.enabled:
cls.define_views(metadata, schema)
def test_nullable_reflection(self):
# TODO figure out why pytest treats unittest.skip as a failure
pass
def test_numeric_reflection(self):
# TODO figure out why pytest treats unittest.skip as a failure
pass
def test_varchar_reflection(self):
typ = self._type_round_trip(sql_types.String(52))[0]
assert isinstance(typ, sql_types.String)
class HasTableTest(suite.HasTableTest):
@classmethod
def define_tables(cls, metadata):
Table('test_table', metadata,
Column('id', Integer),
Column('data', String(50))
)
class OrderByLabelTest(suite.OrderByLabelTest):
_ran_insert_data = False
@classmethod
def define_tables(cls, metadata):
Table("some_table", metadata,
Column('id', Integer),
Column('x', Integer),
Column('y', Integer),
Column('q', String(50)),
Column('p', String(50))
)
@classmethod
def insert_data(cls):
if not cls._ran_insert_data: # MapReduce is slow
cls._ran_insert_data = True
config.db.execute('''
INSERT OVERWRITE TABLE some_table SELECT stack(3,
1, 1, 2, 'q1', 'p3',
2, 2, 3, 'q2', 'p2',
3, 3, 4, 'q3', 'p1'
) AS (id, x, y, q, p) FROM default.one_row
''')
class TableDDLTest(fixtures.TestBase):
def _simple_fixture(self):
return Table('test_table', self.metadata,
Column('id', Integer),
Column('data', String(50))
)
def _simple_roundtrip(self, table):
# Inserting data into Hive is hard.
pass
# These test rely on inserting data, which is hard in Hive.
# TODO could in theory compile insert statements using insert select from a known one row table.
BooleanTest = None
DateTimeMicrosecondsTest = None
DateTimeTest = None
InsertBehaviorTest = None
IntegerTest = None
NumericTest = None
RowFetchTest = None
SimpleUpdateDeleteTest = None
StringTest = None
TextTest = None
TimeMicrosecondsTest = None
TimeTest = None
UnicodeTextTest = None
UnicodeVarcharTest = None

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@ -2,6 +2,13 @@
tag_build = dev
[pytest]
addopts = --cov pyhive --cov-report html --cov-report term
addopts = --tb=short --cov pyhive --cov-report html --cov-report term
norecursedirs = env
python_files = test_*.py
[sqla_testing]
requirement_cls=pyhive.tests_sqlalchemy.hive_requirements:Requirements
profile_file=.profiles.txt
[db]
default=hive://hadoop@localhost:10000/sqlalchemy_test