Brian Hoang
e43e3dca51
Fixed this batch api ( #378 )
2021-05-19 09:23:09 -07:00
Brian Hoang
0c2af42fde
Added warning on README.md ( #376 )
2021-05-10 09:32:10 -07:00
Brian Hoang
56661a4233
Fix: Resize Cluster ( #371 )
...
* Added resize cluster
* Added fix for autoscale file
2020-10-27 09:19:21 -07:00
Brian Hoang
d206fd68c2
Added github authentication package in pool installation ( #365 )
2019-08-13 09:55:24 -07:00
Brian Hoang
9e9b4942f4
Release: v0.8.0 ( #357 )
2019-06-20 14:08:27 -07:00
Brian Hoang
96bfc22662
Fix: Upgrading to R Batch SDK to 2018-12-01.8.0 ( #354 )
...
* Added resource files
* Added resource files
* Removed comments
* Fixed resource files documentation
* Added check on job state
* Fixed jobState
2019-06-18 21:04:30 -07:00
Brian Hoang
93f3fbc6fd
v0.7.3 ( #356 )
2019-06-18 12:46:28 -07:00
Brian Hoang
a2154d2115
Update pipeline.yml for Azure Pipelines
2019-04-16 13:57:01 -07:00
Brian Hoang
975858072e
Fix: Test Coverage on Azure Pipeline CI ( #348 )
...
* Added build.sh
* Fixed tests
* Added pipeline yml
* Fixed pipeline
* Removed
* Passing in args to script
* Added container image
* Fixed args
* Fixed args
* Fixed args
* Removed last script
* Added test management
* Added job dependency
* Moved package installation to build.sh
* fixed
* Added job dependency
* Added RProfile site
* Fixed REnvironment
* Added Rprofile
* Added ~/
* Fixing tests
* fixed method name
* Renaming samples & tests
* renamed more tests
* Fixed lint
* Removed other tests
* Fixed directory call for testthat
* Added typo and remove sample
* Fixed pipeline pointer
2019-02-13 21:36:40 -08:00
Brian Hoang
372e382048
Fix: Revert Cluster Setup File ( #342 )
...
* Reverted changes of cluster setup
* Reverted cluster setup file
2019-02-07 12:26:20 -08:00
Søren Vind
ec1a4df838
Bugfix: Don't break when fetching batch-insights ( #340 )
...
Spell batch-insights correctly when fetching file. The bug causes pools orchestrated by doAzureParallel to fail with error TS_STATUS_TVM_STARTUP_TASK_FAILED (and all jobs running in these pools to fail).
2019-02-06 13:38:08 -08:00
Brian Hoang
31eec56655
Feature: Batch Insights support ( #336 )
...
* Added App-Insight Support
* Fixed cluster cluster setup
* mend
* Working App Insights support
* Added docs
* Fixed link to main BatchExplorer page
2019-02-04 18:45:03 -08:00
Brian Hoang
82c149a609
Added documentation for containerImage ( #339 )
2019-02-01 11:23:48 -08:00
Brian Hoang
40b74da14c
Added fix for cluster of autoscale node 0 ( #337 )
2019-01-17 13:31:49 -08:00
angusrtaylor
6d14d4522b
Minor documentation fixes ( #331 )
...
* fix setHttpTraffic documentation
* corrected job error troubleshooting link
* updated getJobFile man page to reflect actual taskID naming
* fixed broken link to managing storage
2018-11-26 11:00:47 -08:00
Brian Hoang
975d68e47b
Fix: Remove unnecessary apt packages installation on job preparation task ( #321 )
...
* Added cluster setup command
* Fixed 404 content not found
* Fixed cluster setup message
* Removed apt-get install
* Removed apt zip packages
* Reversed hunk
2018-11-06 08:00:14 -08:00
Brian Hoang
7192e08f77
Feature: Added Queue/Running Autoscale Formula ( #316 )
...
* Added autoscale for queue and running
* Updated documentation from comments
2018-10-16 09:05:55 -07:00
Brian Hoang
844ebde125
Release: v0.7.2 ( #317 )
...
* Updated DESCRIPTION version
* Updated CHANGELOG.md to v0.7.2
2018-10-08 10:18:28 -07:00
Brian Hoang
96081cca9a
Fix: File share sample ( #312 )
...
* Fixed sample
* Removed unchanged file name
* removed account
* Removed custom script
2018-09-18 14:44:00 -07:00
Brian Hoang
81dcb72fbb
Fix dependency on enum being uppercase ( #310 )
2018-09-13 11:36:13 -07:00
Brian Hoang
4020a93aad
Added github branch installation ( #302 )
2018-09-12 13:04:08 -07:00
Brian Hoang
1d26dd8749
Fix: Documentation typos and fixes ( #307 )
...
* Fixed typos on getting started and cluster methods
* Fixed getCluster test - Remove failed case (Autoscale down to 0)
* Fixed indentation of azure-requirements.md
2018-09-12 11:41:52 -07:00
Brian Hoang
b9ffe3e2e4
Added docs ( #298 )
2018-08-20 11:52:03 -07:00
Brian Hoang
b97f447ca2
Feature: Add Batch Service Built-In Container support ( #291 )
...
* Replaced Virtual Configuration
* Added containerSettings in addTask helper function
* Using new Dockerfile with blobxfer and R
* Removed container settings
* Fixed containerConfiguration lintr
* Fixed description dependency
* Fixed cluster setting
* Fixed R packages installation on pool level
2018-08-14 15:34:50 -07:00
Brian Hoang
ce263e78bd
Fix Azure foreach options documentation ( #288 )
2018-07-13 16:24:32 -07:00
Brian Hoang
ad7acf1c33
Added 0.7.1 changelog version ( #286 )
2018-07-13 15:18:34 -07:00
Brian Hoang
737bf498e8
CHANGELOG for v0.7.1 ( #285 )
2018-07-13 15:13:03 -07:00
Brian Hoang
2b8f388dc4
Fix: Updating Persistent Storage Documentation ( #283 )
...
* Switched to R6 client
* Replaced createContainer function
2018-06-27 11:10:53 -07:00
Brian
8e39df1b6f
Fix: Updated MaxTasksPerNode documentation ( #279 )
...
* Added comment on maxTasksPerNode
* Added bolded note
* After comments
2018-06-06 23:04:30 -07:00
Brian
f35e1e371f
Fixed package strip name ( #278 )
2018-05-31 16:21:21 -07:00
Brian
b24f20c1f1
Switched to R6 sas client ( #276 )
...
* Switched to R6 sas client
* Added storage endpoint suffix
2018-05-18 11:03:43 -07:00
Brian
4983fb120e
Tests/r ( #275 )
...
* Added install R
* Added devtools build
* devtools build and test
* Clean up rscript
* Added line breaks
* Added devtools('.')
* Added testthat package
* Added roxygen
* Replaced rscript
* Test live
* Added environment variables to test
* Fixed test
* Removed
* Fixed tests
* makeClusters to makeCluster
* Error handling to stop exit
* Added params to setup function
* Removed pool names
* Get / Get Cluster List
* Added utility R source
* Fixed tests
* Fixed remove error handling with combine test
* Forgot \ lines
2018-05-17 11:49:38 -07:00
Gopi Kumar
008b0ad46d
Clarifying comment on DSVM ( #274 )
2018-05-17 09:39:45 -07:00
Brian
f418cd972e
Documentation rewrite ( #273 )
...
* Renamed operations
* Fixing docs
* Removed stuff from README.md
* Fixed links for TOC
* Added descriptions for TOC
* Major renaming of files
* Added TOC to main README.md
* Added low pri link
* Added link to vm priority
* Fix broken links
* Added Notable features
2018-05-15 16:22:11 -07:00
Brian
20c86f16ed
Feature/custom package ( #272 )
...
* Added custom package script
* Added feature custom download
* Fixed typo
* Fixed directory for installation
* Fixed full folder directory
* Add dependencies and fix pattern
* Fix pattern not found
* Added repo
* Switching to devtools
* Fixing devtools install with directory
* Fix in for merger.R
* Working cluster custom packages
* Removed printed statements
* Working on custom docs
* Custom packages sample docs
* Fixed typo in azure files typo
* Fixed typos based on PR
2018-05-14 13:47:00 -07:00
Brian
d02599de37
Fixed output ( #270 )
2018-05-11 09:33:49 -07:00
Brian
23079f5b6f
Replaced deprecated function ( #269 )
2018-05-09 16:17:33 -07:00
Brian
84aa7c93f0
Fix/storage management ( #267 )
...
* Removed rAzureBatch from storage api calls
* Fixed quota documentation
* Added job and core quota limits
2018-05-07 09:38:03 -07:00
zfengms
6582af49e2
add sharedKey to credentials related code and doc ( #266 )
2018-05-03 10:49:13 -07:00
zfengms
81a7c16063
Fix/getstartdoc ( #263 )
...
* fix AAD credential config field names
* fix json format
2018-05-02 14:59:07 -07:00
Brian
a28e74e8ba
Added change log details ( #258 )
2018-05-02 13:19:13 -07:00
Brian
1fbb1c366f
Fixed resource files docs ( #262 )
2018-05-02 11:54:25 -07:00
Chris Auld
b6fbcda5a9
Fixing change of named parameter in makeCluster ( #259 )
...
Parameter name looks to have changed. Fixing. There are still some issues that I will open a separate ticket for.
2018-04-30 09:40:57 -07:00
Brian
9dfa59925d
Fixed get workers count function ( #261 )
2018-04-30 09:16:14 -07:00
Brian
958d84f6db
Enable AAD and VNet Support ( #252 )
...
* Added config property for service principal
* Fixed property names for service principal
* Added makeBatchClient and makeStorageClient functions
* Added ARM calls
* Fixed configuration
* Added more working features for AAD auth
* Switched sas token generator
* Added storage client generate sas tokens into doAzureParallel
* basic foreach loop works
* Long running jobs with AAD validated
* Removed credentials output
* Added docs for vnets
* Fixed network configurations for doazp
* Replaced rAzureBatch namespace with batchClient
* Fixed url auth for storage
* Changed cluster parameter naming
* Renamed helper file and fixed lintr
* Wrong file name
* Removed new line
* Removed lowerCamelCase for R6 classes
* Fixed sas token
* Fixed createBlobUrl
* Fixed configuration endpoint suffix
* Fixed endpoint suffix for download merge results
* Added environment parameter in setCredentials
* Added default for endpoint suffix for svp
* Changed default credentials file to shared key
* Updated docs for sharedkey/serviceprincipal
* Updated documentation
* Broken test for doc example
* Fixed lintr for docs
* Updated version to 0.7.0
2018-04-27 17:43:06 -07:00
Brian
80ddceadfb
Updated version v0.6.3 ( #256 )
2018-04-27 17:25:56 -07:00
zfengms
e1a3c14cdf
Feature/getstarted ( #255 )
...
* get started script
* add account_setup.sh
* fix typo
* fix typo
* support shared key
* fix typos
* retrieve batch/storage account keys
* fix bug
* typo
* fix if logic
* fix typo
* bug
* retrieve batch primary key
* storage list_keys
* storage keys
* storage key exceptin
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key\
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key
* storage key\
* storage key
* storage key
* storage key
* delete resource group
* print
* print
* print
* exit from delete rg
* delete resource group
* aad auth
* resource group name
* add docs for get started script
* update python script location
* update doc
* update doc
* update doc
* fix credential setting names
* fix credential setting names
* address review feedback
2018-04-27 11:43:36 -07:00
zfengms
0fbfd4cb07
Feature/pkgmgmtdoc ( #231 )
...
* merge package management doc
* merge packagement docs
* address review feedback (#232 )
* address review feedback
* add reference to github and bioconductor packages in worker
* update package management sample
* update package management doc (#233 )
* address review feedback
* add reference to github and bioconductor packages in worker
* update package management sample
* update package management doc
* remove cluster.json
* remove package installation
2018-04-26 00:50:38 -07:00
Pablo Selem
fa75afbbd2
fix sample link to sas resource files ( #254 )
2018-04-23 12:29:30 -07:00
Pablo Selem
3b0c08742b
Sample - Add a sample for using SAS resource files ( #253 )
...
* resubmit sas resource files example
* fixed typos and grammar
* remove unnecessary github reference
2018-04-23 11:08:08 -07:00