* fix: Fixed bug where every underlying LGBMRegressor or LGBMClassifier had n_estimators = 1
* test: Added test showing case where FLAMLised CatBoostModel result isn't reproducible
* fix: Fixing issue where callbacks cause LGBM results to not be reproducible
* Update test/automl/test_regression.py
Co-authored-by: Li Jiang <bnujli@gmail.com>
* fix: Adding back the LGBM EarlyStopping
* refactor: Fix tweaked to ensure other models aren't likely to be affected
* test: Fixed test to allow reproduced results to be better than the FLAML results, when LGBM earlystopping is involved
---------
Co-authored-by: Daniel Grindrod <Daniel.Grindrod@evotec.com>
Co-authored-by: Li Jiang <bnujli@gmail.com>
* Merged PR 1444697: Fix json dumps TypeError
Fix json dumps TypeError
----
Bug fix to address a `TypeError` in `json.dumps`.
This pull request fixes a `TypeError` encountered when using `json.dumps` on `automl._automl_user_configurations` by introducing a safe JSON serialization function.
- Added `safe_json_dumps` function in `flaml/fabric/mlflow.py` to handle non-serializable objects.
- Updated `MLflowIntegration` class in `flaml/fabric/mlflow.py` to use `safe_json_dumps` for JSON serialization.
- Modified `test/automl/test_multiclass.py` to test the new `safe_json_dumps` function.
Related work items: #3439408
* Fix data transform issue and spark log_loss metric compute error
* fix: CatBoostRegressors metrics are now reproducible
* test: Made tests live, which ensure the reproducibility of catboost models
* fix: Added defunct line of code as a comment
* fix: Re-adding removed if statement, and test to show one issue that if statement can cause
* fix: Stopped ending CatBoost training early when time budget is running out
---------
Co-authored-by: Daniel Grindrod <Daniel.Grindrod@evotec.com>
* Remove temporary pickle files
* Update version to 2.3.1
* Use TemporaryDirectory for pickle and log_artifact
* Fix 'CatBoostClassifier' object has no attribute '_get_param_names'
* Add more spark models and improved mlflow integration
* Update test_extra_models, setup and gitignore
* Remove autofe
* Remove autofe
* Remove autofe
* Sync changes in internal
* Fix test for env without pyspark
* Fix import errors
* Fix tests
* Fix typos
* Fix pytorch-forecasting version
* Remove internal funcs, rename _mlflow.py
* Fix import error
* Fix dependency
* Fix experiment name setting
* Fix dependency
* Update pandas version
* Update pytorch-forecasting version
* Add warning message for not has_automl
* Fix test errors with nltk 3.8.2
* Don't enable mlflow logging w/o an active run
* Fix pytorch-forecasting can't be pickled issue
* Update pyspark tests condition
* Update synapseml
* Update synapseml
* No parent run, no logging for OSS
* Log when autolog is enabled
* upgrade code
* Enable autolog for tune
* Increase time budget for test
* End run before start a new run
* Update parent run
* Fix import error
* clean up
* skip macos and win
* Update notes
* Update default value of model_history
* Fix typos, upgrade yarn packages, add some improvements
* Fix joblib 1.4.0 breaks joblib-spark
* Fix xgboost test error
* Pin xgboost<2.0.0
* Try update prophet to 1.5.1
* Update github workflow
* Revert prophet version
* Update github workflow
* Update install libomp
* Fix test errors
* Fix test errors
* Add retry to test and coverage
* Revert "Add retry to test and coverage"
This reverts commit ce13097cd5.
* Increase test budget
* Add more data to test_models, try fixing ValueError: Found array with 0 sample(s) (shape=(0, 252)) while a minimum of 1 is required.
* support xgboost 2.0
* try classes_
* test version
* quote
* use_label_encoder
* Fix xgboost test error
* remove deprecated files
* remove deprecated files
* remove deprecated import
* replace deprecated import in integrate_spark.ipynb
* replace deprecated import in automl_lightgbm.ipynb
* formatted integrate_spark.ipynb
* replace deprecated import
* try fix driver python path
* Update python-package.yml
* replace deprecated reference
* move spark python env var to other section
* Update setup.py, install xgb<2 for MacOS
* Fix typo
* assert
* Try assert xgboost version
* Fail fast
* Keep all test/spark to try fail fast
* No need to skip spark test in Mac or Win
* Remove assert xgb version
* Remove fail fast
* Found root cause, fix test_sparse_matrix_xgboost
* Revert "No need to skip spark test in Mac or Win"
This reverts commit a09034817f.
* remove assertion
---------
Co-authored-by: Li Jiang <bnujli@gmail.com>
Co-authored-by: levscaut <57213911+levscaut@users.noreply.github.com>
Co-authored-by: levscaut <lwd2010530@qq.com>
Co-authored-by: Li Jiang <lijiang1@microsoft.com>
* fix generate_reply
* code format
* add test case
* update
* update
* Update test/autogen/agentchat/test_responsive_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* Update test/autogen/agentchat/test_responsive_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* Update flaml/autogen/agentchat/responsive_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
---------
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* max consecutive auto reply
* chess notebook
* link to notebook
* clear history
* filter
* **context -> context
* format str template
* groupchat
* register class specific reply
* groupchat notebook
* move human reply into generate_reply
* arg in config
* colab link
* remove room
* rename
* update colab link
* typo
* upload file instruction
* update system message and notebooks
* update notebooks
* notebook test
* aoai api version and exclusion
* gpt-3.5-turbo
* dict check
* change model for test
* endpoints, cache_path and func description update
* model list
* gitter -> discord
* add funccall example and doc
* revise to comments
* Update website/docs/Use-Cases/Auto-Generation.md
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* revise
* update
* minor update
* add test notebook
* update
---------
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* add doc for spark
* labelCol equals to label by default
* change title and reformat
* reference about default index type
* fix doc build
* Update website/docs/Examples/Integrate - Spark.md
* update doc
* Added more references
* remove exception case when `y_train.name` is None
* fix broken link
---------
Co-authored-by: Wendong Li <v-wendongli@microsoft.com>
Co-authored-by: Li Jiang <bnujli@gmail.com>
* update funccall
* code format
* update to comments
* update notebook
* remove test for py3.7
* allow funccall to class functions
* add test and clean up notebook
* revise notebook and test
* update
* update mathagent
* Update flaml/autogen/agent/agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* Update flaml/autogen/agent/user_proxy_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* revise to comments
* revise function call design, notebook and test. add doc
* code format
* ad message_to_dict function
* update mathproxyagent
* revise docstr
* update
* Update flaml/autogen/agent/math_user_proxy_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* Update flaml/autogen/agent/math_user_proxy_agent.py
Co-authored-by: Qingyun Wu <qingyun.wu@psu.edu>
* Update flaml/autogen/agent/user_proxy_agent.py
Co-authored-by: Qingyun Wu <qingyun.wu@psu.edu>
* simply funccall in userproxyagent, rewind auto-gen.md, revise to comments
* code format
* update
* remove notebook for another pr
* revise oai_conversation part in agent, revise function exec in user_proxy_agent
* update test_funccall
* update
* update
* fix pydantic version
* Update test/autogen/test_agent.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* fix bug
* fix bug
* update
* update is_termination_msg to accept dict
---------
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
Co-authored-by: Qingyun Wu <qingyun.wu@psu.edu>
Co-authored-by: Li Jiang <bnujli@gmail.com>
* Refactor into automl subpackage
Moved some of the packages into an automl subpackage to tidy before the
task-based refactor. This is in response to discussions with the group
and a comment on the first task-based PR.
Only changes here are moving subpackages and modules into the new
automl, fixing imports to work with this structure and fixing some
dependencies in setup.py.
* Fix doc building post automl subpackage refactor
* Fix broken links in website post automl subpackage refactor
* Fix broken links in website post automl subpackage refactor
* Remove vw from test deps as this is breaking the build
* Move default back to the top-level
I'd moved this to automl as that's where it's used internally, but had
missed that this is actually part of the public interface so makes sense
to live where it was.
* Re-add top level modules with deprecation warnings
flaml.data, flaml.ml and flaml.model are re-added to the top level,
being re-exported from flaml.automl for backwards compatability. Adding
a deprecation warning so that we can have a planned removal later.
* Fix model.py line-endings
* WIP
* WIP - Notes below
Got to the point where the methods from AutoML are pulled to
GenericTask. Started removing private markers and removing the passing
of automl to these methods. Done with decide_split_type, started on
prepare_data. Need to do the others after
* Re-add generic_task
* Most of the merge done, test_forecast_automl fit succeeds, fails at predict()
* Remaining fixes - test_forecast.py passes
* Comment out holidays-related code as it's not currently used
* Further holidays cleanup
* Fix imports in a test
* tidy up validate_data in time series task
* Test fixes
* Fix tests: add Task.__str__
* Fix tests: test for ray.ObjectRef
* Hotwire TS_Sklearn wrapper to fix test fail
* Attempt at test fix
* Fix test where val_pred_y is a list
* Attempt to fix remaining tests
* Push to retrigger tests
* Push to retrigger tests
* Push to retrigger tests
* Push to retrigger tests
* Remove plots from automl/test_forecast
* Remove unused data size field from Task
* Fix import for CLASSIFICATION in notebook
* Monkey patch TFT to avoid plotting, to fix tests on MacOS
* Monkey patch TFT to avoid plotting v2, to fix tests on MacOS
* Monkey patch TFT to avoid plotting v2, to fix tests on MacOS
* Fix circular import
* remove redundant code in task.py post-merge
* Fix test: set svd_solver="full" in PCA
* Update flaml/automl/data.py
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* Fix review comments
* Fix task -> str in custom learner constructor
* Remove unused CLASSIFICATION imports
* Hotwire TS_Sklearn wrapper to fix test fail by setting
optimizer_for_horizon == False
* Revert changes to the automl_classification and pin FLAML version
* Fix imports in reverted notebook
* Fix FLAML version in automl notebooks
* Fix ml.py line endings
* Fix CLASSIFICATION task import in automl_classification notebook
* Uncomment pip install in notebook and revert import
Not convinced this will work because of installing an older version of
the package into the environment in which we're running the tests, but
let's see.
* Revert c6a5dd1a0
* Fix get_classification_objective import in suggest.py
* Remove hcrystallball docs reference in TS_Sklearn
* Merge markharley:extract-task-class-from-automl into this
* Fix import, remove smooth.py
* Fix dependencies to fix TFT fail on Windows Python 3.8 and 3.9
* Add tensorboardX dependency to fix TFT fail on Windows Python 3.8 and 3.9
* Set pytorch-lightning==1.9.0 to fix TFT fail on Windows Python 3.8 and 3.9
* Set pytorch-lightning==1.9.0 to fix TFT fail on Windows Python 3.8 and 3.9
* Disable PCA reduction of lagged features for now, to fix svd convervence fail
* Merge flaml/main into time_series_task
* Attempt to fix formatting
* Attempt to fix formatting
* tentatively implement holt-winters-no covariates
* fix forecast method, clean class
* checking external regressors too
* update test forecast
* remove duplicated test file, re-add sarimax, search space cleanup
* Update flaml/automl/model.py
removed links. Most important one probably was: https://robjhyndman.com/hyndsight/ets-regressors/
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
* prevent short series
* add docs
* First attempt at merging Holt-Winters
* Linter fix
* Add holt-winters to TimeSeriesTask.estimators
* Fix spark test fail
* Attempt to fix another spark test fail
* Attempt to fix another spark test fail
* Change Black max line length to 127
* Change Black max line length to 120
* Add logging for ARIMA params, clean up time series models inheritance
* Add more logging for missing ARIMA params
* Remove a meaningless test causing a fail, add stricter check on ARIMA params
* Fix a bug in HoltWinters
* A pointless change to hopefully trigger the on and off KeyError in ARIMA.fit()
* Fix formatting
* Attempt to fix formatting
* Attempt to fix formatting
* Attempt to fix formatting
* Attempt to fix formatting
* Add type annotations to _train_with_config() in state.py
* Add type annotations to prepare_sample_train_data() in state.py
* Add docstring for time_col argument of AutoML.fit()
* Address @sonichi's comments on PR
* Fix formatting
* Fix formatting
* Reduce test time budget
* Reduce test time budget
* Increase time budget for the test to pass
* Remove redundant imports
* Remove more redundant imports
* Minor fixes of points raised by Qingyun
* Try to fix pandas import fail
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Try to fix pandas import fail, again
* Formatting fixes
* More formatting fixes
* Added test that loops over TS models to ensure coverage
* Fix formatting issues
* Fix more formatting issues
* Fix random fail in check
* Put back in tests for ARIMA predict without fit
* Put back in tests for lgbm
* Update test/test_model.py
cover dedup
* Match target length to X length in missing test
---------
Co-authored-by: Mark Harley <mark.harley@transferwise.com>
Co-authored-by: Mark Harley <mharley.code@gmail.com>
Co-authored-by: Qingyun Wu <qingyun.wu@psu.edu>
Co-authored-by: Chi Wang <wang.chi@microsoft.com>
Co-authored-by: Andrea W <a.ruggerini@ammagamma.com>
Co-authored-by: Andrea Ruggerini <nescio.adv@gmail.com>
Co-authored-by: Egor Kraev <Egor.Kraev@tw.com>
Co-authored-by: Li Jiang <bnujli@gmail.com>
* update openai model support
* new gpt3.5
* docstr
* function_call and content may co-exist
* test function call
---------
Co-authored-by: Qingyun Wu <qingyun.wu@psu.edu>
Daniel Grindrod
Li Jiang
Jirka Borovec
Gleb Levitski
Chi Wang
Yiran Wu
levscaut
Shaokun
EgorKraevTransferwise
Qingyun Wu