ba4d5618c3
silent doc fix in modelServR. build update
2019-05-10 22:19:30 +00:00
8a894cab02
Update the max model size allowed through upload
2019-05-10 14:24:47 -07:00
4c8ae728ec
Fix typo in url
2019-05-10 13:56:08 -07:00
ecec9bab95
Update external docs in swagger
2019-05-10 13:54:11 -07:00
d157b31c3e
Fix name of API in docs
2019-05-10 13:51:54 -07:00
6ca3aa12bf
Add error responses to the query api
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Add additional error handling
Give more verbose and useful errors from the API
2019-05-10 13:46:29 -07:00
da4c44f99d
API full documentation
2019-05-10 13:27:31 -07:00
0fff0c14a4
progress on #56
2019-05-10 13:16:28 -07:00
c3190b77e6
Add additional documentation to the query API
2019-05-10 13:13:54 -07:00
b170e05581
Improve production builds
2019-05-10 12:34:05 -07:00
73f4ab437d
Merge remote-tracking branch 'origin/master'
2019-05-10 12:33:49 -07:00
dbb5265371
Update id method on python side to match R
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Fix database init
Update swagger doc
Make saving RDS optional with flag to saveModel
2019-05-10 12:33:40 -07:00
6f218b97f8
fixed latent save bug
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modified build for only seattle (until #56 is solved).
2019-05-10 19:24:51 +00:00
59ff336161
cleaned up Rproj files and removed outdated text files
2019-05-10 11:56:07 -07:00
47d83a4545
Merge branch 'master' of github.com:seattleflu/incidence-mapper
2019-05-10 10:59:26 -07:00
86de797fc2
fixed observed filename construction
2019-05-10 17:52:11 +00:00
0dd76ac7da
Merge pull request #55 from seattleflu/connect-to-real-data
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Connect to real data
2019-05-10 10:27:03 -07:00
c6ee33f36b
Merge branch 'master' of github.com:seattleflu/incidence-mapper
2019-05-10 09:50:39 -07:00
d3d035de20
Ready for production.
2019-05-10 16:09:16 +00:00
0c42821847
Merge pull request #54 from seattleflu/add-pathogen
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Add pathogen
2019-05-10 07:51:37 -07:00
36dfcc4bed
Update example with pathogen array
2019-05-10 07:48:57 -07:00
25db3bff29
Add pathogen to model ids/queries
2019-05-10 07:47:54 -07:00
dd6e825010
fixed label bugs introduced a few commits ago.
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also re-arranged models for deployment
2019-05-10 04:02:48 +00:00
9f88ee6692
#46 closed with quick simulation
2019-05-10 02:59:56 +00:00
72497405f5
moved and renamed census exploration
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removed out of data testLatentField
2019-05-10 02:54:33 +00:00
fe01ae8f3a
#46 -- adding link for "poisson", but "binomial" mean and variance requires proper marginal transformation.
2019-05-10 02:46:14 +00:00
55b3e77818
added option to build models from simulated_data
2019-05-10 01:30:42 +00:00
25f45b9097
added pathogen-handling fix for selectFromDB to play nice with anticipated changes to modelServR.
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also, fixed heading in saveModel
2019-05-10 01:29:54 +00:00
119febbadf
moved buildModelsForDeployment to top-level folder, closing #41
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Also, fixed residual age-filtering bug
2019-05-10 00:30:20 +00:00
e58ed4cc11
Merge branch 'connect-to-real-data' of https://github.com/seattleflu/incidence-mapper into connect-to-real-data
2019-05-10 00:26:43 +00:00
2d755d6541
reconnected age bins with database, closing #43
2019-05-10 00:26:18 +00:00
a3e195ad64
Merge pull request #52 from seattleflu/connect-to-real-data
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made modelServR logging roxygen and r-namespace compliant
2019-05-09 15:12:22 -07:00
8063cfe822
Merge branches 'connect-to-real-data' and 'master' of github.com:seattleflu/incidence-mapper into connect-to-real-data
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# Conflicts:
# modelServR/R/returnModel.R
# modelServR/R/saveModel.R
2019-05-09 15:12:06 -07:00
e1242195a9
Ensure package builds through roxygen
2019-05-09 15:07:47 -07:00
d5883b56ca
made modelServR compliant with Roxygen and R-package styling
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- also changed age-distribution prior
2019-05-09 21:52:48 +00:00
d2bb771d90
Update logging initialization
2019-05-09 14:50:47 -07:00
bf6b5ecd14
Don't set host so ui can be used everywhere
2019-05-09 14:03:02 -07:00
af7a357b7e
Fix port on prod compose
2019-05-09 13:49:14 -07:00
5c200510e9
Update production compose to include docker socket
2019-05-09 13:34:53 -07:00
97af1ed317
Ensure postgres is available for production
2019-05-09 13:24:32 -07:00
ac56fce5b0
removed misnamed `buildSmoothModelsForDeployment.R` and kept useful parts in `testSmoothModel.R`
2019-05-09 20:17:26 +00:00
9494fcb9ce
minor change to work with shp references in expandDB
2019-05-09 20:07:41 +00:00
c05a650ae2
Add example for request to query url
2019-05-09 13:05:56 -07:00
821de55f75
Move to port 80
2019-05-09 13:02:16 -07:00
69b005d2a4
Merge pull request #50 from seattleflu/master
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merge master into connect-to-real-data toward merge back
2019-05-09 12:36:05 -07:00
89cb260e91
Remove worker from production docker-compose
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Disable wsgi file handler since our docker connection doesn't properly implemnt the full TextIO spec
Allow models to be uploaded up to 10m
Add configuration options for using debug_tokens and creating db. useful for dev
2019-05-09 12:34:48 -07:00
8530b509dc
Compress csv files
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Point to new api server path
Add model store volume
2019-05-09 11:48:43 -07:00
e1821498be
Merge connect real data
2019-05-09 11:39:02 -07:00
ebc4914224
Merge pull request #49 from seattleflu/load-save-model
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Load save model
2019-05-09 11:33:56 -07:00
77cbc250bb
Improve API
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Support csv/json
2019-05-09 11:32:24 -07:00
famulare
Clinton.Collins
famulare
Mike Famulare
Clinton Collins
Clinton Collins