MLHyperparameterTuning/utilities
Mario Bourgoin 5dbae3f958 Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
..
README.md Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
__init__.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
cluster.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
config.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
dataset.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
experiment.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
job.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
job_factory.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
requirements.txt Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00
setup.py Rename to give priority to Batch AI. 2018-08-29 16:15:06 +00:00

README.md

Batch AI Utilities

A collection of tools for creating and monitoring jobs using the Azure Batch AI Python SDK.

Features

  • support for configuration files (for Azure Active Directory and Azure Storage credentials)
  • show status of clusters and jobs
  • list and download output files from jobs
  • wait on job completion and stream output from jobs
  • job factories to generate jobs with parameter sweeps and file enumeration
  • bulk job submission and resubmission of failed jobs
  • metric extraction from job logfile

User Guides

For more usage examples, see the recipes/ folder in the Batch AI repository.

Job Factory

The Job Factory tool enables generating collections of jobs with parameter sweeps and file enumeration, and easy-to-use parameter substitution.

Use Cases

  • enumerating combinations of parameters as configuration variables in a training script (e.g. for hyperparameter tuning)
  • creating a job for each file in an Azure File/Blob storage (e.g. train one model per data file)

Features

  • supports numerical parameters, discrete parameters, and files in an Azure File/Blob storage
  • substitutes parameters into JobCreateParameters object

Usage

Performing a parameter sweep involves two steps: defining parameter specifications and substituting parameters into your JobCreateParameters object. In this example, we create 4 jobs with different learning rates, implemented via a command line argument to the input script.

1. Define Parameter Specifications

Create a list of parameter specifications:

from utilities.job_factory import NumericParameter, ParameterSweep
from utilities.experiment import ExperimentUtils

param_list = [
    NumericParameter(
        parameter_name='LEARNING_RATE',
        start=1e-4,
        end=1e-1,
        data_type='REAL',
        num_values=4,
        scale="LOG"
    ) # will generate [1e-4, 1e-3, 1e-2, 1e-1]
]

For more details on the types of parameters allowed, see below.

2. Substitute Parameters into JobCreateParameters

Create a ParameterSweep object as a template for parameters:

parameters = ParameterSweep(param_list)

Use this object to specify where you want parameters substituted:

jcp = models.JobCreateParameters(
    cluster=models.ResourceId(
        id=cluster.id),
    node_count=2,
    input_directories=input_directories,
    std_out_err_path_prefix=std_output_path_prefix,
    container_settings=models.ContainerSettings(
        image_source_registry=models.ImageSourceRegistry(
            image='tensorflow/tensorflow:1.8.0-gpu')),
    tensor_flow_settings=models.TensorFlowSettings(
        python_script_file_path='$AZ_BATCHAI_INPUT_SCRIPT/train.py',
        master_command_line_args='--learning-rate={0}'.format(parameters['LEARNING_RATE'])))

In the 4 jobs that are submitted, models.JobCreateParameters.tensor_flow_settings.master_command_line_args will equal --learning-rate=1e-4, --learning-rate=1e-3, --learning-rate=1e-2, and --learning-rate=1e-1. Furthermore, an environment variable $PARAM_LEARNING_RATE will be set in the job container.

The parameters[<parameter_name>] variable can be used with string substitution (like above) or directly to substitute a variable (e.g. node_count=parameters['NODE_COUNT'] and master_command_line_args=parameters['CMD_LINE_ARGS']').

3. Generate Jobs

To generate the jobs with a grid search, use the following code. The number of jobs generated will be the product of the number of possible values for each parameter. Every possible combination of parameters will be enumerated.

jobs_to_submit, param_combinations = parameters.generate_jobs(jcp)

To generate the jobs with a random search, use the following code. You must specify the number of jobs to generate. Each job will contain a randomly generated value of each parameter.

num_jobs = 16
jobs_to_submit, param_combinations = parameters.generate_jobs_random_search(jcp, num_jobs)

The variable jobs_to_submit is a list of JobCreateParameters objects. The variable param_combinations is a list of dictionaries which contain the parameter names and values for each job in jobs_to_submit.

To submit the jobs:

experiment_utils = ExperimentUtils(client, resource_group_name, workspace_name, experiment_name)
jobs = experiment_utils.submit_jobs(jobs_to_submit, parameters, "job_name_prefix").result()

Parameter Specifications

This library supports four types of parameters:

Numerical Parameters

Arguments:

  • parameter_name: the name of the parameter. Only capital letters and underscores are allowed. Required.
  • data_type: "INTEGER" or "REAL". If "INTEGER", all generated values will be rounded to the nearest integer. For "REAL", decimal values will be retained. Required.
  • start: the lowest value of this parameter (inclusive). Required.
  • end: the highest value of this parameter (inclusive). Required.
  • scale: "LINEAR" or "LOG" or "RANDOM_UNIFORM"; how values should be distributed in the range [start, end]. Required.
  • num_values: num_values: the number of values to generate in the range. Required if performing grid search sweep and scale is "LOG".
  • step: step: the interval size between each parameter. Required if performing grid search sweep and scale is "LINEAR".

Examples:

NumericParameter(
    parameter_name="BATCH_SIZE",
    start=10,
    end=50,
    step=10,
    data_type='INTEGER',
    scale="LINEAR"
)
# will generate [10, 20, 30, 40, 50]
NumericParameter(
    parameter_name="LEARNING_RATE",
    start=1e-4,
    end=1e-1,
    data_type='REAL',
    num_values=4,
    scale="LOG"
)
# will generate [1e-4, 1e-3, 1e-2, 1e-1]

Discrete Parameters

For specifying a custom list of parameters.

Arguments:

  • parameter_name: the name of the parameter. Only capital letters and underscores are allowed. Required.
  • values: a list of values for the parameter. The values supplied must be a string, integer, or float. Required.

Examples:

DiscreteParameter(
    parameter_name="DEVICE_ID",
    values=["Device_1", "Device_2", "Device_3"]
)
# will generate ["Device_1", "Device_2", "Device_3"]

Dictionary Parameters

For specifying a custom list of parameters, which each parameter is a dictionary of parameters. This method allows pairs of parameters to be grouped together during combination generation.

Arguments:

  • parameter_name: the name of the parameter. Only capital letters and underscores are allowed. Required.
  • values: a list of values for the parameter, where each value is a dictionary.

Examples:

DictParameter(
    parameter_name="HYPERPARAMS",
    values=[{
        "LEARNING_RATE": 1e-4,
        "HIDDEN_LAYER_SIZE": 100
    }, {
        "LEARNING_RATE": 1e-3,
        "HIDDEN_LAYER_SIZE": 200
    }, {
        "LEARNING_RATE": 1e-2,
        "HIDDEN_LAYER_SIZE": 300
    }]
)
# will generate 3 jobs

The values can be substituted with parameters['HYPERPARAMS']['LEARNING_RATE'] and parameters['HYPERPARAMS']['HIDDEN_LAYER_SIZE'].

File Parameters

For generating a list of files stored in an Azure File/Blob storage. The File share or Blob container must be mounted to the job (or the cluster the job is running on) for file parameter sweeping to work.

Arguments:

  • parameter_name: the name of the parameter. Only capital letters and underscores are allowed. Required.
  • storage_account_name: the name of the Azure storage account to use. Required.
  • storage_account_key: the key of the Azure storage account to use. Required.
  • storage_type: "BLOB" or "FILE". Whether accessing files in Azure Blob container or an Azure File share. Required.
  • mount_method: "JOB" or "CLUSTER". Whether the Azure storage volume was mounted through the JobCreateParameters or ClusterCreateParameters. Required.
  • mount_path: the models.AzureBlobFileSystemReference.relative_mount_path or models.AzureFileShareReference.relative_mount_path specified when mounting the Blob container or File share. Required.
  • container: the name of the Blob container. Required if storage_type is "BLOB".
  • fileshare: the name of the File share. Required if storage_type is "FILE".
  • directory: the directory that contains the files to be listed. If unspecified, all files in the File share will be listed (this may take a long time).
  • filter_str: a regex, used with re.match, which must match the full path of the file for the file to be returned. If unspecified, all files will be returned.

Examples:

FileParameter(
    parameter_name="DATA_INPUT",
    storage_account_name="example_name",
    storage_account_key="example_key",
    storage_type="BLOB",
    mount_method="JOB",
    mount_path="bfs",
    container="example_container",
    filter_str="/data/.+"
)
# if example_container contains the blobs
# - /other/a.txt
# - /b.txt
# - /data/c.txt
# - /data/d.txt
# then this parameter will generate ['$AZ_BATCHAI_MOUNT_ROOT/bfs/data/c.txt', '$AZ_BATCHAI_MOUNT_ROOT/bfs/data/d.txt']
FileParameter(
    parameter_name="DATA_INPUT",
    storage_account_name="example_name",
    storage_account_key="example_key",
    storage_type="FILE",
    mount_path="afs",
    fileshare="example_share",
    directory="data"
)
# if example_share contains the files
# - /other/a.txt
# - /b.txt
# - /data/c.txt
# - /data/d.txt
# then this parameter will generate ['$AZ_BATCHAI_MOUNT_ROOT/afs/data/c.txt', '$AZ_BATCHAI_MOUNT_ROOT/afs/data/d.txt']

Experiment Utilities

The ExperimentUtils class has several methods for helping submit and monitor jobs in an experiment.

Usage

To use ExperimentUtils, create an object using a BatchAIManagementClient instance, and the name of the experiment you wish to use.

from utilities.experiment import ExperimentUtils
experiment_utils = ExperimentUtils(client, resource_group_name, workspace_name, experiment_name)

Bulk Job Submission

submit_jobs(jcp_list, job_name_prefix, max_retries=NUM_RETRIES, num_threads=NUM_THREADS)

Submit jobs with the list of JobCreateParameters in jcp_list. Jobs have name job_name_prefix with a hash of the JobCreateParameters object appended.

Arguments

  • jcp_list: a list of JobCreateParameters objects to submit
  • job_name_prefix: prefix for job names
  • max_retries: number of retries if server returns 5xx for submission
  • num_threads: number of threads to use for submission
  • return: a concurrent.futures.Future object. Call .result() on the return object to get the list of azure.mgmt.batchai.models.Job submitted

Wait All Jobs

wait_all_jobs(job_names=None, on_progress=None)

Block until all jobs in the experiment are completed (succeeded or failed).

Arguments

  • job_names: names of jobs to wait for. If None, wait until all jobs in experiment are completed.
  • on_progress: a function that wait_all_jobs will call every 10 secs with list of azure.mgmt.batchai.models.Job, representing current state of jobs
  • timeout: number of seconds to wait before unblocking
  • return: list of completed Jobs

Resubmit Failed Jobs

resubmit_failed_jobs(job_names=None, max_retries=NUM_RETRIES, num_threads=NUM_THREADS)

Resubmit the failed jobs in an experiment.

Arguments

  • job_names: names of jobs to resubmit. If None, all jobs will be resubmitted.
  • max_retries: number of retries if server returns 5xx for submission
  • num_threads: number of threads to use for submission
  • return: list of Jobs that were resubmitted

Get Metrics for Jobs

get_metrics_for_jobs(jobs, metric_extractor)

Gets the metrics for a collection of jobs in the experiment.

Arguments

  • jobs: a collection of azure.mgmt.batchai.models.Job objects
  • metric_extractor: an instance of utilities.job.MetricExtractor
  • return: a list of dictionaries with keys "job_name" (the name of the job), "job" (the Job object), "metric_value" (the extracted value of the metric).

Delete Jobs in Experiment

delete_jobs_in_experiment(execution_state=None, job_names=None, num_threads=NUM_THREADS)

Delete the jobs in the experiment.

Arguments

  • execution_state: one of azure.mgmt.batchai.models.ExecutionState. Delete only jobs with this execution state. If None, delete jobs regardless of execution state.
  • job_names: List of names of jobs to resubmit. If none, all failed jobs in the experiment are resubmitted.
  • job_name_regex: regex used with re.match to match names of jobs to delete
  • num_threads: number of threads to use for deletion.
  • return: None