8c24c80bb3
Satlas pretrained Swin Transformer v2 models ( #1358 )
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* add satlas pretrained models
* update swin_b -> swin_v2_b
* update docs
* swin_b -> swin_v2_b again
* add the tests
* tests
* fix isort error
* update weights csv files
* swin_v2_b added in torchvision 0.14 so update min reqs
* fix swin_v2_b weights api
* torchvision 0.14.0 depends on torch 1.13.0
* fix docs
* fix docs
* fix swin docs
* update comment and import from root module
* update torch/torchvision min versions
* Move to satellite-specific tables
* Move to satellite-specific tables
---------
Co-authored-by: Caleb Robinson <calebrob6@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-25 20:39:43 +00:00
4c64bbe53a
Bump torchvision from 0.16.0 to 0.16.1 in /requirements ( #1729 )
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* Bump torchvision from 0.16.0 to 0.16.1 in /requirements
Bumps [torchvision](https://github.com/pytorch/vision ) from 0.16.0 to 0.16.1.
- [Release notes](https://github.com/pytorch/vision/releases )
- [Commits](https://github.com/pytorch/vision/commits )
---
updated-dependencies:
- dependency-name: torchvision
dependency-type: direct:production
update-type: version-update:semver-patch
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* Bump torch too
* Ignore pytest warning
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2023-11-16 05:34:47 -06:00
1fc0f2726e
pytest: ignore distutils usage in torchmetrics ( #1688 )
2023-10-28 08:32:59 -05:00
c7832d4ed4
Bump lightning[pytorch-extra] from 2.0.9.post0 to 2.1.0 in /requirements ( #1662 )
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* Bump lightning[pytorch-extra] from 2.0.9.post0 to 2.1.0 in /requirements
Bumps [lightning[pytorch-extra]](https://github.com/Lightning-AI/lightning ) from 2.0.9.post0 to 2.1.0.
- [Release notes](https://github.com/Lightning-AI/lightning/releases )
- [Commits](https://github.com/Lightning-AI/lightning/compare/2.0.9.post0...2.1.0 )
---
updated-dependencies:
- dependency-name: lightning[pytorch-extra]
dependency-type: direct:production
update-type: version-update:semver-minor
...
Signed-off-by: dependabot[bot] <support@github.com>
* Remove type ignores
* Capture more warnings
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2023-10-13 16:33:37 -05:00
1216617087
Bump torchvision from 0.15.2 to 0.16.0 in /requirements ( #1619 )
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* Bump torchvision from 0.15.2 to 0.16.0 in /requirements
Bumps [torchvision](https://github.com/pytorch/vision ) from 0.15.2 to 0.16.0.
- [Release notes](https://github.com/pytorch/vision/releases )
- [Commits](https://github.com/pytorch/vision/compare/v0.15.2...v0.16.0 )
---
updated-dependencies:
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dependency-type: direct:production
update-type: version-update:semver-minor
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* Bump torch too
* Ignore warning
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2023-10-13 20:04:05 +00:00
27be503789
CI: minimize storage usage ( #1658 )
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* CI: minimize storage usage
* Ignore warning in Python 3.9
* newer pytest required
* bump pytest-cov too
2023-10-13 10:43:41 -07:00
7faf0bb49a
Bump nbmake from 1.4.3 to 1.4.5 in /requirements ( #1614 )
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* Bump nbmake from 1.4.3 to 1.4.5 in /requirements
Bumps [nbmake](https://github.com/treebeardtech/nbmake ) from 1.4.3 to 1.4.5.
- [Release notes](https://github.com/treebeardtech/nbmake/releases )
- [Commits](https://github.com/treebeardtech/nbmake/compare/v1.4.3...v1.4.5 )
---
updated-dependencies:
- dependency-name: nbmake
dependency-type: direct:production
update-type: version-update:semver-patch
...
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* Update pkg_resources deprecation msg
* Keep old msg too
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-10-04 07:41:25 -05:00
984e222790
Add command line script ( #1559 )
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* Add command line script
* Label PRs correctly
* Flake8 fix
* Add callbacks
* Update all conf files
* Enforce class of model/data
* Update BYOL tests
* Update all tests
* Use default num workers: 0
* Variable interpolation only supported by omegaconf backend
* Fix regression tests
* Ensure that jsonargparse is installed during testing
* Bump minimimum lightning version
* Workaround for lightning/jsonargparse bugs
* Ignore Python 3.9 warning message
* Add test coverage for __main__.py
* Increase coverage of PixelwiseRegressionTask
* jsonargparse bug fixed in latest release
* Revert "jsonargparse bug fixed in latest release"
This reverts commit 4f38cdfca3
2023-09-27 10:11:52 -07:00
1b0ca5a5a8
Ensure that none of our minimum version tests are skipped ( #1587 )
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* Ensure that none of our minimum version tests are skipped
* Try pyvista instead
* Try no version
* What is going on
* Try pyvista 0.32.0
* Try pyvista 0.35.0
* Try pyvista 0.35.1
* Try pyvista 0.34.0
* Try pyvista 0.34.2
* Try pyvista 0.34.1
* 0.34.2 is the new min version
2023-09-25 10:51:36 -05:00
dbf7a5287f
Promote pandas to a required dependency ( #1586 )
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* Promote pandas to a required dependency
* Update dep files too
* Remove unused imports
2023-09-25 08:09:12 -07:00
f0cacd5402
Bump kornia from 0.6.12 to 0.7.0 in /requirements ( #1507 )
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* Bump kornia from 0.6.12 to 0.7.0 in /requirements
Bumps [kornia](https://github.com/kornia/kornia ) from 0.6.12 to 0.7.0.
- [Release notes](https://github.com/kornia/kornia/releases )
- [Changelog](https://github.com/kornia/kornia/blob/master/CHANGELOG.md )
- [Commits](https://github.com/kornia/kornia/compare/v0.6.12...v0.7.0 )
---
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dependency-type: direct:production
update-type: version-update:semver-minor
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* Ignore warning out of our control
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2023-08-02 23:04:47 +00:00
745f0ea68c
Remove upper bounds from dependencies ( #1480 )
2023-07-20 20:01:47 +00:00
17e1de36bb
Bump minimum support pycocotools version ( #1484 )
2023-07-19 09:20:13 -05:00
e75edab85b
Bump torchmetrics from 0.11.4 to 1.0.0 in /requirements ( #1465 )
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* Bump torchmetrics from 0.11.4 to 1.0.0 in /requirements
Bumps [torchmetrics](https://github.com/Lightning-AI/torchmetrics ) from 0.11.4 to 1.0.0.
- [Release notes](https://github.com/Lightning-AI/torchmetrics/releases )
- [Changelog](https://github.com/Lightning-AI/torchmetrics/blob/master/CHANGELOG.md )
- [Commits](https://github.com/Lightning-AI/torchmetrics/compare/v0.11.4...v1.0.0 )
---
updated-dependencies:
- dependency-name: torchmetrics
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* Bump max version
* mdmc_average -> multidim_average
* debugging
* Workaround for bug in MAP dict
* Workaround for bug in MAP dict
* Workaround for bug in MAP dict
* Workaround for bug in MAP dict
---------
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2023-07-06 16:54:34 +00:00
fa6542d91a
Bump pillow from 9.5.0 to 10.0.0 in /requirements ( #1462 )
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* Bump pillow from 9.5.0 to 10.0.0 in /requirements
Bumps [pillow](https://github.com/python-pillow/Pillow ) from 9.5.0 to 10.0.0.
- [Release notes](https://github.com/python-pillow/Pillow/releases )
- [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst )
- [Commits](https://github.com/python-pillow/Pillow/compare/9.5.0...10.0.0 )
---
updated-dependencies:
- dependency-name: pillow
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* Bump max version
---------
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2023-07-03 21:37:20 +00:00
9f381b0bbb
Bump pyvista from 0.39.1 to 0.40.0 in /requirements ( #1458 )
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* Bump pyvista from 0.39.1 to 0.40.0 in /requirements
Bumps [pyvista](https://github.com/pyvista/pyvista ) from 0.39.1 to 0.40.0.
- [Release notes](https://github.com/pyvista/pyvista/releases )
- [Commits](https://github.com/pyvista/pyvista/compare/v0.39.1...v0.40.0 )
---
updated-dependencies:
- dependency-name: pyvista
dependency-type: direct:production
update-type: version-update:semver-minor
...
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* Bump upper bound
---------
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2023-06-30 22:00:19 +00:00
ce55e6d56d
Move project configuration from setup.cfg to pyproject.toml ( #1446 )
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* Move project configuration from setup.cfg to pyproject.toml
* Bump minimum setuptools
* Ignore warning
* I wasn't asking
* Add more emails
2023-06-30 16:37:33 -05:00
946a9c47ac
Bump setuptools from 67.8.0 to 68.0.0 in /requirements ( #1429 )
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* Bump setuptools from 67.8.0 to 68.0.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 67.8.0 to 68.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v67.8.0...v68.0.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* Bump setuptools max
---------
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2023-06-20 01:33:52 +00:00
e0f9ece591
Drop Python 3.8 support ( #1246 )
2023-04-15 20:27:51 -05:00
e9113e31ae
Fix tests when PyTorch built with MPS support ( #1188 )
2023-03-22 15:26:45 +03:00
392d46737c
Bump pytorch-lightning[extra] from 1.9.4 to 2.0.0 in /requirements ( #1178 )
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* Bump pytorch-lightning[extra] from 1.9.4 to 2.0.0 in /requirements
Bumps [pytorch-lightning[extra]](https://github.com/Lightning-AI/lightning ) from 1.9.4 to 2.0.0.
- [Release notes](https://github.com/Lightning-AI/lightning/releases )
- [Commits](https://github.com/Lightning-AI/lightning/compare/1.9.4...2.0.0 )
---
updated-dependencies:
- dependency-name: pytorch-lightning[extra]
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* Remove deprecated features
* pytorch_lightning -> lightning
* bump radiant-mlhub too
* isort fix
* lightning does not yet have public type hints
* More ignores
* blanket ignore
* blanket ignore
* Fix function typo
---------
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2023-03-16 11:14:48 -05:00
8239e1acc7
Bump setuptools from 67.3.1 to 67.4.0 in /requirements ( #1133 )
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* Bump setuptools from 67.3.1 to 67.4.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 67.3.1 to 67.4.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v67.3.1...v67.4.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-minor
...
Signed-off-by: dependabot[bot] <support@github.com>
* Update deprecation warning format
* module masking...
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2023-02-21 16:34:48 -06:00
75a1bea965
Bump kornia from 0.6.9 to 0.6.10 in /requirements ( #1123 )
...
Bumps [kornia](https://github.com/kornia/kornia ) from 0.6.9 to 0.6.10.
- [Release notes](https://github.com/kornia/kornia/releases )
- [Changelog](https://github.com/kornia/kornia/blob/master/CHANGELOG.md )
- [Commits](https://github.com/kornia/kornia/compare/v0.6.9...v0.6.10 )
---
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update-type: version-update:semver-patch
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2023-02-18 17:03:47 +00:00
829adc34ed
Bump setuptools from 67.2.0 to 67.3.1 in /requirements ( #1115 )
...
Bumps [setuptools](https://github.com/pypa/setuptools ) from 67.2.0 to 67.3.1.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v67.2.0...v67.3.1 )
---
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- dependency-name: setuptools
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update-type: version-update:semver-minor
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2023-02-14 22:21:46 +00:00
509b459d23
Bump setuptools from 66.1.1 to 67.0.0 in /requirements ( #1066 )
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* Bump setuptools from 66.1.1 to 67.0.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 66.1.1 to 67.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v66.1.1...v67.0.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* bump setuptools upper bound
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2023-01-30 18:30:37 +00:00
fc7a993058
Drop Python 3.7 support ( #1058 )
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* Drop Python 3.7 support
* Don't update torch
* Drop version specifier
* Update pyupgrade
* Update OpenCV
* Python 3.8-specific code changes
* Clean up step name
* bump pillow
2023-01-30 11:17:34 -06:00
098f58026f
tensorboardX should not raise DeprecationWarning unless python backend is forced ( #1050 )
2023-01-29 15:02:49 -08:00
49dfb0d460
0.4.0 release ( #1036 )
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* 0.4.0 release
* Fix issues with missing tensorboardX dependency
* Fix more issues with integration tests
* fix trainers.ipynb
* header level pretrained.ipynb
* Fix typo in usavars.py
* Seed arg was removed
* pretrained, 3 channel
* Slow means slow
* Need to actually download the dataset
* versionchanged should be minor version only
* Remove VisionDataset
* Faster train.py tests
* See what's slow
* Flake8 fix
* Need to download the dataset
* Inria datamodule: needs augs during test stage too
Co-authored-by: Nils Lehmann <nils.lehmann24@gmail.com>
2023-01-24 15:23:14 -08:00
7c2868814f
Add plot method for VHR10 dataset ( #847 )
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* Add plot fn & rename nwpu -> vhr10
* Update test data & add data.py
* Add scikit-image dependency
* Move scikit-image dep to extras
* Comment out check for coverage
* Move skimage import
* Update requirements
* Test requirements
* Update requirements
* Update
* Update
* Update
* Update
* Update
* Update min scipy
* Update min scipy
* Update min scipy
* Update min scipy
* Update min scipy
* Update skimage
* Review comments#1
* Update skimage
* Revert rename to nwpu
* Revert renames
* Update min scipy
* Fix data dirname
* More fixes
* Bump numpy minor version
* Update scipy
* Going back to what worked
* Ignore numpy warning
* Edit
* Edit warning
* Ignore another warning
* Insanity
* Fix pooch
* Try older skimage
* Try older scipy
* scipy 1.2.0
* scipy 1.4.0
* scipy 1.5.0
* scipy 1.4.2
* scipy 1.6.0
* scipy 1.5.4
* scipy 1.5.2
* scipy 1.5.1
* scipy 1.5.1 is new min dep version
* Fix skip
* Newer scipy
* scipy 1.6.3
* scipy 1.6.0
* scipy 1.6.1
* scipy 1.6.2
* scipy 1.6.2 is new min
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-01-22 23:37:24 -06:00
03d4b5eac9
Bump setuptools from 65.7.0 to 66.0.0 in /requirements ( #1017 )
...
* Bump setuptools from 65.7.0 to 66.0.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 65.7.0 to 66.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v65.7.0...v66.0.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-major
...
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* Bump max setuptools versions
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-01-16 22:18:53 +00:00
2bf1a3614b
Add datamodule for GID-15 dataset ( #928 )
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* add datamodule with crop logic
* remove print and fix batch_size
* typo
* Use Kornia augmentations
* Style
* Ignore warning
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-12-30 11:31:00 -06:00
61cd1c1013
pyproject.toml: silence protobuf deprecation warning ( #973 )
2022-12-24 14:13:08 -06:00
a498ccaa6f
Bump pytorch-lightning from 1.7.4 to 1.7.5 in /requirements ( #771 )
2022-09-07 23:29:12 -05:00
b0bdc9c8e2
setuptools 65 is now tested ( #753 )
2022-09-03 10:46:38 -07:00
13c5c8a257
Bump setuptools from 63.4.3 to 64.0.0 in /requirements ( #715 )
...
* Bump setuptools from 63.4.3 to 64.0.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 63.4.3 to 64.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v63.4.3...v64.0.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-major
...
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* Bump maximum setuptools version
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2022-08-11 21:28:29 +00:00
044d901dca
Bump pytorch-lightning from 1.6.5 to 1.7.0 in /requirements ( #697 )
...
* Bump pytorch-lightning from 1.6.5 to 1.7.0 in /requirements
Bumps [pytorch-lightning](https://github.com/Lightning-AI/lightning ) from 1.6.5 to 1.7.0.
- [Release notes](https://github.com/Lightning-AI/lightning/releases )
- [Commits](https://github.com/Lightning-AI/lightning/compare/1.6.5...pl/1.7.0 )
---
updated-dependencies:
- dependency-name: pytorch-lightning
dependency-type: direct:production
update-type: version-update:semver-minor
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Signed-off-by: dependabot[bot] <support@github.com>
* Remove protobuf restrictions
* LightningModule was moved
* Mypy fixes
* Ensure same behavior
* Fix docs
* Silence warnings
* Change error message location
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-08-02 16:39:10 -07:00
76139f60df
0.3.0 release ( #664 )
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* 0.3.0 release
* Slightly different distutils deprecation warning
* Fix release tests
* Escape regex in warning ignore
* Escape characters require literal strings
* Colon was problematic
* Re-escape regex patterns
* Fix tests without optional dependencies
* Fix tests without optional dependencies
* Try older nbmake
* Try older nbmake
* Try explicitly passing key
* Black fixes
* Document when parameters were added
* Document more changes
2022-07-10 22:30:48 -07:00
d137589a96
Get tests to pass locally with Spack installation
2022-07-09 09:32:38 -07:00
8b191fb5c1
Bump setuptools from 62.6.0 to 63.1.0 in /requirements ( #650 )
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* Bump setuptools from 62.6.0 to 63.1.0 in /requirements
Bumps [setuptools](https://github.com/pypa/setuptools ) from 62.6.0 to 63.1.0.
- [Release notes](https://github.com/pypa/setuptools/releases )
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst )
- [Commits](https://github.com/pypa/setuptools/compare/v62.6.0...v63.1.0 )
---
updated-dependencies:
- dependency-name: setuptools
dependency-type: direct:production
update-type: version-update:semver-major
...
Signed-off-by: dependabot[bot] <support@github.com>
* Bump max supported version of setuptools
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-07-05 10:13:08 -07:00
627473c609
Better README ( #626 )
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* Better README
* Update description
2022-06-29 22:25:59 -07:00
0783560c9c
Ignore pytorch-sphinx-theme installation ( #615 )
2022-06-24 13:41:24 -07:00
8c5e4d21cd
Test minimum version of deps ( #574 )
2022-06-18 08:00:45 -07:00
7a9a9c1d64
Resolve DeprecationWarnings ( #567 )
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* Resolve DeprecationWarnings
* Fix PIL version check
* Add ignores, hide ignores
* Always specify max_epochs
* Re-add one of the ignores that was removed
* Silence ColorJitter behavior change warnings
* Fix num_workers warning on macOS
* Ignore coverage of lines missed by older pillow versions
* Fix support for pre/post versions of PIL
* Wordsmithing
* Remove unused imports
2022-06-13 10:38:17 -07:00
28aa174dcb
Add upper bounds to dep versions ( #557 )
2022-06-05 17:37:49 -05:00
3baf1ef7f2
Drop Python 3.6 support ( #482 )
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* Drop Python 3.6 support
* pandas 0.23.2+ required for Python 3.7+ support
* Update environment.yml too
2022-03-29 13:58:46 -05:00
4bd4f2acdc
Run linters on tests/data ( #356 )
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* Run linters on tests/data
* Configuration: use .gitignore for tool skip
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-01-13 19:16:10 +00:00
0a635d40b8
Ignore GPU warnings
2022-01-01 17:07:13 +00:00
eb6961d546
Add comments explaining pytest filterwarnings
2021-12-30 14:46:27 -06:00
744078fcff
Refactor datamodule/model testing ( #329 )
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* Refactor RegressionTask testing
* Programmatically determine max value
* Refactor ClassificationTask testing
* Silence warnings
* Refactor SegmentationTask testing
* Fix training mappings
* Fix GeoDataset trainers
* Fix ETCI trainer fake data
* Update OSCD training data
* Get LandCoverAI tests to pass
* Fix OSCD checksum handling
* Fix NAIP-Chesapeake tests
* Fix OSCD tests
* Keep BoundingBox icy
* Fix other datamodules
* Fix chesapeake testing
* Refactor BYOLTask tests
* Style fixes
* Silence pytorch-lightning warnings
* Get coverage for Chesapeake CVPR prior
* Fix trainer tests
2021-12-30 13:54:47 -06:00
0d4811b752
functionality for learning on the prior with QR loss and ChesapeakeCVPR data ( #202 )
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* adding QR loss functions for learning on the prior
* chesapake learn on prior trainer with self-contained code for visualization
* adding prior dataset to the chesapeake datasets; doesn't handle downloading or anything like that yet
* updating init files to include chesapeake CVPR prior
* adding FCNModified for learning on the prior
* changing input to samplers to pass dataset instead of dataset.index
* fixing style issues
* Removing FCN_modified
* Fixing super call and mypy in FCN model
* Added learning on the prior extension
* Update tests
* Formatting
* Adding QR loss
* Added losses to docs
* Removing trainer, moving datamodule
* Combining chesapeake and chesapeake prior datamodules
* Formatting
* Test coverage
* Formatting
* Adding losses
* Re-moving the datamodules around
* Make loss function a torch Module
* Version added
* Fixed some stuff that got messed up in the rebase
* Formatting
* How'd this get there?
* Change qr losses to expect probabilities instead of log-probabilities
* Clean up test
* Rename qr loss file
* Renamed test file
Co-authored-by: Caleb Robinson <calebrob6@gmail.com>
2021-12-28 14:56:14 -06:00
Isaac Corley
dependabot[bot]
Adam J. Stewart
Ashwin Nair
Nils Lehmann
estherrolf